Per Broberg,
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/SAGx |
| Branch: RELEASE_3_10 |
| Last Commit: 4878e17 |
| Last Changed Date: 2019-10-29 13:07:44 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:04:48 -0400 (Wed, 15 Apr 2020).
| Package 1508/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SAGx 1.60.0 Per Broberg,
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: SAGx |
| Version: 1.60.0 |
| Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL SAGx |
| StartedAt: 2020-04-14 18:10:47 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:10:56 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 9.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL SAGx
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* installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’
* installing *source* package ‘SAGx’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c minigsea.c -o minigsea.o
minigsea.c: In function ‘MiniGSEA’:
minigsea.c:8:12: warning: variable ‘k’ set but not used [-Wunused-but-set-variable]
int i,j,k,I;
^
gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c newboot.c -o newboot.o
gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c samrocNboot.c -o samrocNboot.o
gcc -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o SAGx.so minigsea.o newboot.o samrocNboot.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-SAGx/00new/SAGx/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SAGx)