| Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:20:11 -0400 (Wed, 15 Apr 2020).
| Package 505/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| EDASeq 2.20.0 Davide Risso
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: EDASeq |
| Version: 2.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/EDASeq_2.20.0.tar.gz && rm -rf EDASeq.buildbin-libdir && mkdir EDASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDASeq.buildbin-libdir EDASeq_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL EDASeq_2.20.0.zip && rm EDASeq_2.20.0.tar.gz EDASeq_2.20.0.zip |
| StartedAt: 2020-04-14 19:53:43 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:54:54 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 71.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/EDASeq_2.20.0.tar.gz && rm -rf EDASeq.buildbin-libdir && mkdir EDASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDASeq.buildbin-libdir EDASeq_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL EDASeq_2.20.0.zip && rm EDASeq_2.20.0.tar.gz EDASeq_2.20.0.zip
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install for i386
* installing *source* package 'EDASeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'EDASeq'
finding HTML links ... done
EDASeq-package html
finding level-2 HTML links ... done
MDPlot-methods html
SeqExpressionSet-class html
barplot-methods html
betweenLaneNormalization-methods html
biasBoxplot-methods html
biasPlot-methods html
boxplot-methods html
getGeneLengthAndGCContent html
meanVarPlot-methods html
newSeqExpressionSet html
plot-methods html
plotNtFrequency-methods html
plotPCA-methods html
plotQuality-methods html
plotRLE-methods html
withinLaneNormalization-methods html
yeastGC html
yeastLength html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'EDASeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EDASeq' as EDASeq_2.20.0.zip
* DONE (EDASeq)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'EDASeq' successfully unpacked and MD5 sums checked