| Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:34:10 -0400 (Wed, 15 Apr 2020).
| Package 1769/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| twilight 1.62.0 Stefanie Scheid
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | [ OK ] | OK | WARNINGS | OK |
| Package: twilight |
| Version: 1.62.0 |
| Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL twilight |
| StartedAt: 2020-04-14 18:13:10 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:13:45 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 34.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL twilight
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library’
* installing *source* package ‘twilight’ ...
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c confidence.line.c -o confidence.line.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c correlation.c -o correlation.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c kstest.c -o kstest.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sep.c -o sep.o
sep.c:70:16: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
ix[randnum]=fabs(1-ix[randnum]);
^
sep.c:70:16: note: use function 'abs' instead
ix[randnum]=fabs(1-ix[randnum]);
^~~~
abs
sep.c:97:20: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
ix[randnum]=fabs(1-ix[randnum]);
^
sep.c:97:20: note: use function 'abs' instead
ix[randnum]=fabs(1-ix[randnum]);
^~~~
abs
sep.c:116:19: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
ix[randnum]=fabs(1-ix[randnum]);
^
sep.c:116:19: note: use function 'abs' instead
ix[randnum]=fabs(1-ix[randnum]);
^~~~
abs
sep.c:143:16: warning: using floating point absolute value function 'fabs' when argument is of integer type [-Wabsolute-value]
ix[randnum]=fabs(1-ix[randnum]);
^
sep.c:143:16: note: use function 'abs' instead
ix[randnum]=fabs(1-ix[randnum]);
^~~~
abs
4 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c twosample.perm.c -o twosample.perm.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c twosample.single.c -o twosample.single.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o twilight.so confidence.line.o correlation.o kstest.o sep.o twosample.perm.o twosample.single.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-twilight/00new/twilight/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (twilight)