Laurent Gautier
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/altcdfenvs |
| Branch: RELEASE_3_10 |
| Last Commit: ae877d2 |
| Last Changed Date: 2019-10-29 13:07:28 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:16:56 -0400 (Wed, 15 Apr 2020).
| Package 48/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| altcdfenvs 2.48.0 Laurent Gautier
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: altcdfenvs |
| Version: 2.48.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/altcdfenvs_2.48.0.tar.gz && rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=altcdfenvs.buildbin-libdir altcdfenvs_2.48.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL altcdfenvs_2.48.0.zip && rm altcdfenvs_2.48.0.tar.gz altcdfenvs_2.48.0.zip |
| StartedAt: 2020-04-14 19:14:16 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:14:52 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 35.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/altcdfenvs_2.48.0.tar.gz && rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=altcdfenvs.buildbin-libdir altcdfenvs_2.48.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL altcdfenvs_2.48.0.zip && rm altcdfenvs_2.48.0.tar.gz altcdfenvs_2.48.0.zip
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install for i386
* installing *source* package 'altcdfenvs' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
in method for 'toHypergraph' with signature '"CdfEnvAffy"': no definition for class "CdfEnvAffy"
** help
*** installing help indices
converting help for package 'altcdfenvs'
finding HTML links ... done
AffyProbesMatch-class html
CdfEnvAffy-class html
appendCdfEnvAffy html
buildCdfEnv.biostrings html
cdfenv html
cdfenvEx html
copyCdfEnvAffy html
countduplicated html
geneNames html
getxy.probeseq html
index2xy html
indexProbes.CdfEnvAffy html
matchAffyProbes html
plot.CdfEnvAffy html
removeIndex html
toHypergraph html
unique.CdfEnvAffy html
utils.FASTA html
validAffyBatch html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'altcdfenvs' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'altcdfenvs' as altcdfenvs_2.48.0.zip
* DONE (altcdfenvs)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'altcdfenvs' successfully unpacked and MD5 sums checked