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Package 88/479HostnameOS / ArchBUILDCHECKBUILD BIN
chipseq 1.3.0
Biocore Team c/o BioC user list
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/chipseq
Last Changed Rev: 56258 / Revision: 56603
Last Changed Date: 2011-06-16 17:46:40 -0700 (Thu, 16 Jun 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64 [ ERROR ] skipped  skipped 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pitt Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: chipseq
Version: 1.3.0
Command: chmod a+r chipseq -R && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data chipseq
StartedAt: 2011-07-06 23:34:59 -0700 (Wed, 06 Jul 2011)
EndedAt: 2011-07-06 23:37:19 -0700 (Wed, 06 Jul 2011)
EllapsedTime: 140.5 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'chipseq/DESCRIPTION' ... OK
* preparing 'chipseq':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: IRanges

Attaching package: 'IRanges'

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: GenomicRanges
Loading required package: BSgenome
Loading required package: Biostrings
Loading required package: ShortRead
Loading required package: lattice
Loading required package: Rsamtools
Loading required package: latticeExtra
Loading required package: RColorBrewer

Error: processing vignette 'Workflow.Rnw' failed with diagnostics:
 chunk 25 
Error in RleViewsList(rleList = subject, rangesList = start) : 
  'rangesList' must be a RangesList object
Execution halted