Back to the "Multiple platform build/check report"[A] B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 13/479HostnameOS / ArchBUILDCHECKBUILD BIN
affy 1.31.2
Rafael A. Irizarry
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/affy
Last Changed Rev: 56151 / Revision: 56603
Last Changed Date: 2011-06-13 15:14:15 -0700 (Mon, 13 Jun 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK [ OK ]
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: affy
Version: 1.31.2
Command: mkdir affy.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=affy.buildbin-libdir affy_1.31.2.tar.gz
StartedAt: 2011-07-07 06:48:28 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 06:48:39 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 11.3 seconds
RetCode: 0
Status:  OK  
PackageFile: affy_1.31.2.zip
PackageFileSize: 1.484 MiB

Command output

* installing *source* package 'affy' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/library/zlibbioc/include" -I"D:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"D:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O2 -Wall  -std=gnu99 -c chipbackground.c -o chipbackground.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/library/zlibbioc/include" -I"D:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"D:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O2 -Wall  -std=gnu99 -c getall_locations.c -o getall_locations.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/library/zlibbioc/include" -I"D:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"D:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O2 -Wall  -std=gnu99 -c mas5calls.c -o mas5calls.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/library/zlibbioc/include" -I"D:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"D:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O2 -Wall  -std=gnu99 -c rma2.c -o rma2.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/library/zlibbioc/include" -I"D:/biocbld/bbs-2.9-bioc/R/include" -DHAVE_ZLIB   -I"D:/biocbld/bbs-2.9-bioc/R/library/preprocessCore/include"      -O2 -Wall  -std=gnu99 -c rma_common.c -o rma_common.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o affy.dll tmp.def chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -LD:/biocbld/bbs-2.9-bioc/R/library/zlibbioc/libs/x64 -lzlib1bioc -LD:/biocbld/bbs-2.9-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/affy.buildbin-libdir/affy/libs/x64
** R
** data
** demo
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Creating a generic function for "open" from package "base" in package "affy"
Creating a generic function for "close" from package "base" in package "affy"
Creating a generic function for "colnames" from package "base" in package "affy"
Creating a generic function for "barplot" from package "graphics" in package "affy"
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'affy.Rnw' 
   'builtinMethods.Rnw' 
   'customMethods.Rnw' 
   'vim.Rnw' 
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'affy' as affy_1.31.2.zip

* DONE (affy)