EBarrays 2.3.0
Ming Yuan
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/EBarrays | | Last Changed Rev: 28098 / Revision: 29143 | | Last Changed Date: 2007-10-21 09:03:02 -0700 (Sun, 21 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | [ OK ] | OK |
* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.2-bioc/meat/EBarrays.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-06 r43609)
* checking for file 'EBarrays/DESCRIPTION' ... OK
* this is package 'EBarrays' version '2.3.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'EBarrays' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating EBarrays-Ex.R ... OK
* checking examples ... OK
* checking tests ...
make[1]: Entering directory `/cygdrive/d/biocbld/bbs-2.2-bioc/meat/EBarrays.Rcheck/tests'
Running 'test.R'
make[1]: Leaving directory `/cygdrive/d/biocbld/bbs-2.2-bioc/meat/EBarrays.Rcheck/tests'
OK
* checking package vignettes in 'inst/doc' ... OK
* creating EBarrays-manual.tex ... OK
* checking EBarrays-manual.tex ... OK
installing R.css in D:/biocbld/bbs-2.2-bioc/meat/EBarrays.Rcheck
---------- Making package EBarrays ------------
adding build stamp to DESCRIPTION
making DLL ...
making ebarrays.d from ebarrays.c
gcc -std=gnu99 -Id:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c ebarrays.c -o ebarrays.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I d:/biocbld/bbs-2.2-bioc/R/include -i EBarrays_res.rc -o EBarrays_res.o
gcc -std=gnu99 -shared -s -o EBarrays.dll EBarrays.def ebarrays.o EBarrays_res.o -Ld:/biocbld/bbs-2.2-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing demos
installing inst files
installing data files
preparing package EBarrays for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: lattice
Loading required package: cluster
installing man source files
installing indices
not zipping data
installing help
Note: ignoring empty \keyword entries
Note: ignoring empty \keyword entries
Note: removing empty section \examples
Note: removing empty section \examples
Note: unmatched right brace in 'postprob' on or after line 66
Note: unmatched right brace in 'postprob.Rd' on or after line 66
>>> Building/Updating help pages for package 'EBarrays'
Formats: text html latex example chm
EBarrays-Internal text html latex chm
crit.fun text html latex example chm
ebarraysFamily-class text html latex example chm
ebplots text html latex chm
emfit text html latex example chm
gould text html latex example chm
postprob text html latex example chm
utilities text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\bbs-2.2-bioc\meat\EBarrays.Rcheck\00_pkg_src\EBarrays\chm\EBarrays.chm
Compile time: 0 minutes, 0 seconds
9 Topics
54 Local links
0 Internet links
1 Graphic
Created d:\biocbld\bbs-2.2-bioc\meat\EBarrays.Rcheck\00_pkg_src\EBarrays\chm\EBarrays.chm, 34,247 bytes
Compression decreased file by 16,997 bytes.
adding MD5 sums
* DONE (EBarrays)