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This page was generated on 2024-09-12 11:40 -0400 (Thu, 12 Sep 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4713
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4444
palomino8Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4450
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4483
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4430
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4428
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1595/2258HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
psygenet2r 1.37.1  (landing page)
Alba Gutierrez-Sacristan
Snapshot Date: 2024-09-11 14:00 -0400 (Wed, 11 Sep 2024)
git_url: https://git.bioconductor.org/packages/psygenet2r
git_branch: devel
git_last_commit: 20b9d14
git_last_commit_date: 2024-08-12 12:38:08 -0400 (Mon, 12 Aug 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for psygenet2r on nebbiolo2

To the developers/maintainers of the psygenet2r package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/psygenet2r.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: psygenet2r
Version: 1.37.1
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 psygenet2r
StartedAt: 2024-09-11 18:52:59 -0400 (Wed, 11 Sep 2024)
EndedAt: 2024-09-11 18:53:24 -0400 (Wed, 11 Sep 2024)
EllapsedTime: 25.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 psygenet2r
###
##############################################################################
##############################################################################


* checking for file ‘psygenet2r/DESCRIPTION’ ... OK
* preparing ‘psygenet2r’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘case_study.Rmd’ using rmarkdown

Quitting from lines 117-124 [search_multiple] (case_study.Rmd)
Error: processing vignette 'case_study.Rmd' failed with diagnostics:
incorrect number of dimensions
--- failed re-building ‘case_study.Rmd’

--- re-building ‘general_overview.Rmd’ using rmarkdown

Quitting from lines 92-94 [dataGenet1] (general_overview.Rmd)
Error: processing vignette 'general_overview.Rmd' failed with diagnostics:
incorrect number of dimensions
--- failed re-building ‘general_overview.Rmd’

SUMMARY: processing the following files failed:
  ‘case_study.Rmd’ ‘general_overview.Rmd’

Error: Vignette re-building failed.
Execution halted