| Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-08-15 11:46 -0400 (Thu, 15 Aug 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4703 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4440 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4472 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4420 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4413 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 501/2255 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| dar 1.1.0 (landing page) Francesc Catala-Moll
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the dar package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/dar.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: dar |
| Version: 1.1.0 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data dar |
| StartedAt: 2024-08-14 21:41:24 -0000 (Wed, 14 Aug 2024) |
| EndedAt: 2024-08-14 21:44:10 -0000 (Wed, 14 Aug 2024) |
| EllapsedTime: 166.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data dar ### ############################################################################## ############################################################################## * checking for file ‘dar/DESCRIPTION’ ... OK * preparing ‘dar’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘article.Rmd’ using rmarkdown [WARNING] This document format requires a nonempty <title> element. Defaulting to 'article.knit' as the title. To specify a title, use 'title' in metadata or --metadata title="...". --- finished re-building ‘article.Rmd’ --- re-building ‘dar.Rmd’ using rmarkdown --- finished re-building ‘dar.Rmd’ --- re-building ‘data_import.Rmd’ using rmarkdown Quitting from lines 151-166 [unnamed-chunk-6] (data_import.Rmd) Error: processing vignette 'data_import.Rmd' failed with diagnostics: argument "..3" is missing, with no default --- failed re-building ‘data_import.Rmd’ --- re-building ‘filtering_subsetting.Rmd’ using rmarkdown --- finished re-building ‘filtering_subsetting.Rmd’ --- re-building ‘import_export_recipes.Rmd’ using rmarkdown --- finished re-building ‘import_export_recipes.Rmd’ SUMMARY: processing the following file failed: ‘data_import.Rmd’ Error: Vignette re-building failed. Execution halted