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This page was generated on 2024-09-13 17:34 -0400 (Fri, 13 Sep 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4760
palomino7Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4497
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1583/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PLSDAbatch 1.0.0  (landing page)
Yiwen (Eva) Wang
Snapshot Date: 2024-09-11 14:00 -0400 (Wed, 11 Sep 2024)
git_url: https://git.bioconductor.org/packages/PLSDAbatch
git_branch: RELEASE_3_19
git_last_commit: 397c738
git_last_commit_date: 2024-04-30 11:53:17 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped

BUILD results for PLSDAbatch on palomino7

To the developers/maintainers of the PLSDAbatch package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PLSDAbatch.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: PLSDAbatch
Version: 1.0.0
Command: chmod a+r PLSDAbatch -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data PLSDAbatch
StartedAt: 2024-09-11 20:43:39 -0400 (Wed, 11 Sep 2024)
EndedAt: 2024-09-11 20:46:11 -0400 (Wed, 11 Sep 2024)
EllapsedTime: 151.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   chmod a+r PLSDAbatch -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data PLSDAbatch
###
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* checking for file 'PLSDAbatch/DESCRIPTION' ... OK
* preparing 'PLSDAbatch':
* checking DESCRIPTION meta-information ...Warning in person1(given = given[[i]], family = family[[i]], middle = middle[[i]],  :
  It is recommended to use 'given' instead of 'middle'.
 OK
* installing the package to process help pages
Loading required namespace: PLSDAbatch
Warning: replacing previous import 'mixOmics::pca' by 'vegan::pca' when loading 'PLSDAbatch'
* saving partial Rd database
* creating vignettes ... ERROR
--- re-building 'brief_vignette.Rmd' using rmarkdown

Quitting from lines 629-656 [ADalignment] (brief_vignette.Rmd)
Error: processing vignette 'brief_vignette.Rmd' failed with diagnostics:
'data' must be of a vector type, was 'NULL'
--- failed re-building 'brief_vignette.Rmd'

SUMMARY: processing the following file failed:
  'brief_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted