Back to Multiple platform build/check report for BioC 3.17 |
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This page was generated on 2023-01-10 11:11:26 -0500 (Tue, 10 Jan 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) | x86_64 | R Under development (unstable) (2022-12-10 r83428) -- "Unsuffered Consequences" | 4463 |
palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-12-10 r83428 ucrt) -- "Unsuffered Consequences" | 4244 |
merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-12-10 r83428) -- "Unsuffered Consequences" | 4255 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the tscR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/tscR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 2084/2160 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
tscR 1.11.0 (landing page) Fernando Pérez-Sanz
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ![]() | ||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | ![]() | ||||||||
Package: tscR |
Version: 1.11.0 |
Command: rm -rf tscR.buildbin-libdir && mkdir tscR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh tscR_1.11.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R tscR.buildbin-libdir |
StartedAt: 2023-01-10 10:50:04 -0500 (Tue, 10 Jan 2023) |
EndedAt: 2023-01-10 10:51:33 -0500 (Tue, 10 Jan 2023) |
EllapsedTime: 89.1 seconds |
RetCode: 0 |
Status: OK |
PackageFile: tscR_1.11.0.tgz |
PackageFileSize: 1.763 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf tscR.buildbin-libdir && mkdir tscR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh tscR_1.11.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R tscR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=tscR.buildbin-libdir tscR_1.11.0.tar.gz' >>>>>>> * installing *source* package ‘tscR’ ... ** using staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tscR.c -o tscR.o clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tscR_init.c -o tscR_init.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o tscR.so tscR.o tscR_init.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.17-bioc/meat/tscR.buildbin-libdir/00LOCK-tscR/00new/tscR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tscR) >>>>>>> >>>>>>> FIXING LINKS FOR tscR.buildbin-libdir/tscR/libs/tscR.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.3/Resources/lib/libgcc_s.1.dylib" "tscR.buildbin-libdir/tscR/libs/tscR.so" install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.3/Resources/lib/libgfortran.5.dylib" "tscR.buildbin-libdir/tscR/libs/tscR.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.3/Resources/lib/libquadmath.0.dylib" "tscR.buildbin-libdir/tscR/libs/tscR.so"