Back to Build/check report for BioC 3.16 experimental data |
|
This page was generated on 2023-04-11 14:50:26 -0400 (Tue, 11 Apr 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.3 (2023-03-15) -- "Shortstop Beagle" | 4502 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the ccdata package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 47/416 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
ccdata 1.24.0 (landing page) Alex Pickering
| nebbiolo2 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | WARNINGS | ![]() | |||||||
Package: ccdata |
Version: 1.24.0 |
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:ccdata.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings ccdata_1.24.0.tar.gz |
StartedAt: 2023-04-11 11:31:25 -0400 (Tue, 11 Apr 2023) |
EndedAt: 2023-04-11 11:34:22 -0400 (Tue, 11 Apr 2023) |
EllapsedTime: 177.2 seconds |
RetCode: 0 |
Status: WARNINGS |
CheckDir: ccdata.Rcheck |
Warnings: 1 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD check --install=check:ccdata.install-out.txt --library=/home/biocbuild/bbs-3.16-bioc/R/site-library --timings ccdata_1.24.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.16-data-experiment/meat/ccdata.Rcheck’ * using R version 4.2.3 (2023-03-15) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ‘ccdata/DESCRIPTION’ ... OK * this is package ‘ccdata’ version ‘1.24.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ccdata’ can be installed ... OK * checking installed package size ... NOTE installed size is 894.0Mb sub-directories of 1Mb or more: data 893.9Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... WARNING ./man/cmap_es.Rd: non-ASCII input and no declared encoding ./man/cmap_var.Rd: non-ASCII input and no declared encoding ./man/l1000_es.Rd: non-ASCII input and no declared encoding problems found in ‘cmap_es.Rd’, ‘cmap_var.Rd’, ‘l1000_es.Rd’ * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... NONE * checking PDF version of manual ... OK * DONE Status: 1 WARNING, 1 NOTE See ‘/home/biocbuild/bbs-3.16-data-experiment/meat/ccdata.Rcheck/00check.log’ for details.
ccdata.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD INSTALL ccdata ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.16-bioc/R/site-library’ * installing *source* package ‘ccdata’ ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ccdata)