Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:31:53 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the ISoLDE package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 922/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
ISoLDE 1.18.1 (landing page) Christelle Reynès
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: ISoLDE |
Version: 1.18.1 |
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/ISoLDE_1.18.1.tar.gz && rm -rf ISoLDE.buildbin-libdir && mkdir ISoLDE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ISoLDE.buildbin-libdir ISoLDE_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ISoLDE_1.18.1.zip && rm ISoLDE_1.18.1.tar.gz ISoLDE_1.18.1.zip |
StartedAt: 2021-05-05 16:40:43 -0400 (Wed, 05 May 2021) |
EndedAt: 2021-05-05 16:41:26 -0400 (Wed, 05 May 2021) |
EllapsedTime: 42.4 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/ISoLDE_1.18.1.tar.gz && rm -rf ISoLDE.buildbin-libdir && mkdir ISoLDE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ISoLDE.buildbin-libdir ISoLDE_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ISoLDE_1.18.1.zip && rm ISoLDE_1.18.1.tar.gz ISoLDE_1.18.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 1258k 0 4135 0 0 172k 0 0:00:07 --:--:-- 0:00:07 168k 100 1258k 100 1258k 0 0 31.2M 0 --:--:-- --:--:-- --:--:-- 31.5M install for i386 * installing *source* package 'ISoLDE' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -fopenmp -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Isolde.c -o Isolde.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o ISoLDE.dll tmp.def Isolde.o -fopenmp -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/ISoLDE.buildbin-libdir/00LOCK-ISoLDE/00new/ISoLDE/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ISoLDE' finding HTML links ... done ISoLDE-package html filterT html filteredASRcounts html isolde_test html normASRcounts html rawASRcounts html readNormInput html readRawInput html readTarget html target html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ISoLDE' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -fopenmp -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Isolde.c -o Isolde.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o ISoLDE.dll tmp.def Isolde.o -fopenmp -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/ISoLDE.buildbin-libdir/ISoLDE/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'ISoLDE' as ISoLDE_1.18.1.zip * DONE (ISoLDE) * installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library' package 'ISoLDE' successfully unpacked and MD5 sums checked