Package | Description |
---|---|
pal.alignment |
Classes dealing with sequence alignments, including methods for reading
and printing in several possible formats, as well as rearranging and
concatenating.
|
Modifier and Type | Class and Description |
---|---|
static class |
AlignmentReceiver.BucketReceiver
The SingleReceiver only keeps track of one alignment, the last one it received
|
static class |
AlignmentReceiver.SingleReceiver
The SingleReceiver only keeps track of one alignment, the last one it received
|
Modifier and Type | Method and Description |
---|---|
static void |
AlignmentReaders.readPhylipClustalAlignment(java.io.Reader r,
DataType dt,
AlignmentReceiver receiver)
Read an alignment in phylip/clustal/simple format.
|