readepi: Read Data from Relational Database Management Systems and Health Information Systems

Import Data from Relational Database Management Systems (RDBMS) and Health Information Systems ('HIS'). The current version of the package supports importing data from RDBMS including 'MS SQL', 'MySQL', 'PostGRESQL', and 'SQLite', as well as from two HIS platforms: 'DHIS2' and 'SORMAS'.

Version: 1.0.1
Depends: R (≥ 4.1.0)
Imports: checkmate, cli, DBI, dplyr, httr2, odbc, pool, purrr, RMySQL, RSQLite, tidyr
Suggests: cyclocomp, DiagrammeR, httptest, kableExtra, knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2025-10-01
DOI: 10.32614/CRAN.package.readepi (may not be active yet)
Author: Karim Mané ORCID iD [aut, cre, cph], Emmanuel Kabuga ORCID iD [ctb], Bubacarr Bah ORCID iD [ctb], Bankolé Ahadzie [ctb], Nuredin Mohammed [ctb], Abdoelnaser Degoot [ctb], Hugo Gruson ORCID iD [rev], Pratik Gupte ORCID iD [rev], Andree Valle-Campos ORCID iD [rev], London School of Hygiene and Tropical Medicine, LSHTM [cph], data.org [fnd]
Maintainer: Karim Mané <karim.mane at lshtm.ac.uk>
BugReports: https://github.com/epiverse-trace/readepi/issues
License: MIT + file LICENSE
URL: https://epiverse-trace.github.io/readepi/, https://github.com/epiverse-trace/readepi/, https://github.com/epiverse-trace/readepi
NeedsCompilation: no
SystemRequirements: odbc, libmariadbclient-dev
Citation: readepi citation info
Materials: README, NEWS
CRAN checks: readepi results

Documentation:

Reference manual: readepi.html , readepi.pdf
Vignettes: Package Design vignette for {readepi} (source, R code)
install_drivers (source, R code)
query_parameters (source, R code)
readepi: Reading data from health information systems (source, R code)

Downloads:

Package source: readepi_1.0.1.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=readepi to link to this page.