clinpubr 1.3.0
- Added
screen_data_list() that screens and joins
multi-table clinical data by expression.
- Added
to_wide() that converts long-format clinical data
in database to wide format for analysis and publication.
- Added
keep_by_keyword() to keep string segment by regex
keyword position. Could be used to desensitize character vectors.
- Minor bug fixes and improvements.
clinpubr 1.2.0
- Added
data_overview() to get a quick overview of a data
frame. It includes diagnostic information about common data issues and
gives recommendations for data cleaning.
- Added several outlier detection methods:
mad_outlier(),
zscore_outlier(), iqr_outlier().
- Added
merge_by_substring() to merge data frames by
substring matching.
- Added
recursive argument to
combine_files().
clinpubr 1.1.1
- Fixed PR plot visual inconsistency in
classif_model_compare().
- Added
remove_inequal argument to
value_initial_cleaning().
- Changed the output of
vec2code() to a more robust
format.
- Added a wrapper of
vec2code(), where
name2code(x) is equivalent to
vec2code(names(x)).
- Added
time_roc_plot() that plot time-dependent ROC
curve using timeROC::timeROC().
baseline_table() now uses invisible return if
save_table is TRUE.
- No longer showing the default row ids in auto-saved csv tables.
- Minor bug fixes and improvements.
clinpubr 1.1.0
- Added
time2 argument to functions that support cox
models.
- Added
cluster argument to functions to utilize robust
Robust Covariance Matrix Estimates in cox models and Generalized
Estimating Equations in glm models.
- Added
PRAUC results and PR plot to
classif_model_compare().
- Refactored
rcs_plot() and added a new
predictor_effect_plot() function which can plot linear and
categorical effects.
- Added
exclusion_count() which counts the number of
excluded samples at each exclusion criteria.
- Added
na_min() and na_max(), similar to
base::min() and base::max(), but return
NA if all values are NA and omit
NAs by default.
- Fixed
ggplot2 4.0.0 compatibility.
- Minor improvements.
clinpubr 1.0.2
- Moved some dependencies from “Imports” to “Suggests”.
- Added
combine_multichoice() which combines multichoice
results.
- Added
common_prefix() to find common prefixes in
character vectors.
- Added
group argument to cut_by() to cut
data by quantiles with groupings.
- Added
char_initial_cleaning() to clean character
vectors.
- Added
indicate_duplicates() to determine duplicate
elements, including their first occurrence.
- Minor bug fixes and improvements.
clinpubr 1.0.1
- Fixed potential colname conflict in
df_view_nonnum()
- Modified code according to the CRAN cookbook.
clinpubr 1.0.0