Last updated on 2025-12-07 10:51:00 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| DAISIE | 1 | 3 | 9 | |
| DAMOCLES | 1 | 1 | 11 | |
| DDD | 2 | 11 | ||
| PBD | 1 | 12 | ||
| SADISA | 1 | 1 | 11 | |
| secsse | 1 | 2 | 10 |
Current CRAN status: WARN: 1, NOTE: 3, OK: 9
Version: 4.6.0
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking:
'covr', 'ggtree', 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 4.6.0
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 4.6.0
Check: installed package size
Result: NOTE
installed size is 39.0Mb
sub-directories of 1Mb or more:
libs 36.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 4.6.0
Check: package dependencies
Result: NOTE
Package which this enhances but not available for checking: 'doMC'
Flavor: r-oldrel-windows-x86_64
Current CRAN status: ERROR: 1, NOTE: 1, OK: 11
Version: 2.3
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Rampal S. Etienne <r.s.etienne@rug.nl>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Rampal", "S.", "Etienne", "&", "Alex", "L."),
family = "Pigot",
role = "aut"),
person(given = c("Rampal", "S."),
family = "Etienne",
role = "cre",
email = "r.s.etienne@rug.nl"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 2.3
Check: package dependencies
Result: ERROR
Package required but not available: ‘Hmisc’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: NOTE: 2, OK: 11
Version: 5.2.4
Check: installed package size
Result: NOTE
installed size is 7.9Mb
sub-directories of 1Mb or more:
libs 7.4Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: WARN: 1, NOTE: 12
Version: 1.4
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Rampal S. Etienne <r.s.etienne@rug.nl>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Rampal", "S."),
family = "Etienne",
role = c("aut", "cre"),
email = "r.s.etienne@rug.nl")
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.4
Check: Rd files
Result: NOTE
checkRd: (-1) pbd_loglik.Rd:31: Lost braces
31 | \code{pars2[1]} {set the conditioning on non-extinction of the clade (1) or not (0) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:32: Lost braces
32 | \code{pars2[2]} {sets whether the likelihood is for the branching times (0) or the phylogeny (1) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:33: Lost braces
33 | \code{pars2[3]} {sets whether the first element of the branching times is the stem (1) or the crown (2) age \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:34: Lost braces
34 | \code{pars2[4]} {sets whether the parameters and likelihood should be shown on screen (1) or not (0) \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:35: Lost braces
35 | \code{pars2[5]} {sets which method should be used in the ode-solver. Default is 'lsoda'. See package deSolve for details. \cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:36: Lost braces
36 | \code{pars2[6]}{Sets the lower bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr}
| ^
checkRd: (-1) pbd_loglik.Rd:37: Lost braces
37 | \code{pars2[7]}{Sets the upper bound of the number of species on which conditioning should be done when cond = 2. Set this to 0 when conditioning should be done on precisely the number of species (default)\cr \cr}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.4
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.4
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.4
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘ade4’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: WARN: 1, NOTE: 1, OK: 11
Version: 1.2
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Rampal S. Etienne <r.s.etienne@rug.nl>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Rampal", "S.", "Etienne", "&", "Bart"),
family = "Haegeman",
role = "aut"),
person(given = c("Rampal", "S."),
family = "Etienne",
role = "cre",
email = "r.s.etienne@rug.nl"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.2
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.2
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: WARN: 1, NOTE: 2, OK: 10
Version: 3.5.0
Check: package dependencies
Result: WARN
Cannot process vignettes
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 3.5.0
Check: package vignettes
Result: NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 3.5.0
Check: installed package size
Result: NOTE
installed size is 12.2Mb
sub-directories of 1Mb or more:
doc 1.4Mb
libs 10.4Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64