Last updated on 2025-12-06 10:50:38 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 250.38 | 264.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.78 | 238.17 | 247.95 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 184.00 | 202.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.70 | 287.77 | 303.47 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 172.00 | 184.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 194.00 | 205.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/R_ext/Callbacks.h:32:2: warning: ‘#warning’ before C++23 is a GCC extension [-Wc++23-extensions]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/mapi.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.616, system: 0.054, elapsed: 2.476 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.449, system: 0.127, elapsed: 12.636 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.015, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.838, system: 0.209, elapsed: 4.622 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.005, elapsed: 0.190 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.828, system: 0.442, elapsed: 20.980 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.041, elapsed: 1.667 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.513, system: 0.190, elapsed: 11.697 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.015, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.163, system: 0.296, elapsed: 6.340 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.014, elapsed: 0.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.193, system: 0.601, elapsed: 21.051 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.826, system: 0.096, elapsed: 2.657 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.791, system: 0.302, elapsed: 14.614 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.017, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.187, system: 0.300, elapsed: 7.151 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.007, elapsed: 0.236 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.230, system: 0.245, elapsed: 1.141 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.083, system: 1.022, elapsed: 27.129 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.752, system: 0.082, elapsed: 2.371 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.708, system: 0.204, elapsed: 14.288 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.867, system: 0.227, elapsed: 4.706 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.015, elapsed: 0.262 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.279, system: 0.916, elapsed: 17.539 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.643, system: 1.492, elapsed: 40.267 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/139s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.801, system: 0.073, elapsed: 2.790 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.671, system: 0.203, elapsed: 14.327 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.019, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.015, system: 0.281, elapsed: 6.149 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.439, system: 0.614, elapsed: 24.862 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.841, system: 0.097, elapsed: 2.912 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.848, system: 0.273, elapsed: 16.423 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.018, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.113, system: 0.284, elapsed: 7.784 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.012, elapsed: 0.365 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.739, system: 0.719, elapsed: 28.684 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.758, system: 0.069, elapsed: 2.927 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.772, system: 0.256, elapsed: 13.355 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.386 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.076, system: 0.336, elapsed: 6.570 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.013, elapsed: 0.300 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.225, system: 0.280, elapsed: 1.362 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.858, system: 1.029, elapsed: 26.059 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.941, system: 0.105, elapsed: 3.036 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.746, system: 0.188, elapsed: 20.036 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.014, elapsed: 0.402 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.833, system: 0.189, elapsed: 7.102 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.312 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.794, system: 0.507, elapsed: 19.200 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.355, system: 1.043, elapsed: 51.276 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64