Last updated on 2025-10-16 09:50:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.87 | 254.26 | 268.13 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.13 | 242.39 | 252.52 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.32 | 269.79 | 285.11 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.050, elapsed: 1.691 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.037, system: 0.142, elapsed: 11.250 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.017, elapsed: 0.330 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.864, system: 0.271, elapsed: 5.930 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.006, elapsed: 0.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.302, system: 0.512, elapsed: 20.281 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.058, elapsed: 3.875 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.177, system: 0.232, elapsed: 15.859 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.901, system: 0.242, elapsed: 6.448 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.008, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.616, system: 0.584, elapsed: 27.668 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.730, system: 0.070, elapsed: 2.820 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.131, system: 0.228, elapsed: 14.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.873, system: 0.248, elapsed: 5.614 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.010, elapsed: 0.248 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.222, system: 0.254, elapsed: 1.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.937, system: 0.852, elapsed: 25.566 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.729, system: 0.091, elapsed: 2.535 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.294, system: 0.370, elapsed: 12.675 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.020, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.838, system: 0.267, elapsed: 5.028 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.255 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.285, system: 0.477, elapsed: 29.577 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.157, system: 1.271, elapsed: 51.238 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.513, system: 0.048, elapsed: 1.819 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.889, system: 0.139, elapsed: 11.191 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.014, elapsed: 0.207 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.468, system: 0.202, elapsed: 4.312 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.011, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.742, system: 0.440, elapsed: 18.363 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.697, system: 0.071, elapsed: 2.217 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.980, system: 0.255, elapsed: 10.970 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.297 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.751, system: 0.245, elapsed: 5.617 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.010, elapsed: 0.326 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.318, system: 0.634, elapsed: 20.204 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.070, elapsed: 2.023 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.068, system: 0.233, elapsed: 13.017 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.013, elapsed: 0.454 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.606, system: 0.203, elapsed: 7.268 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.023, elapsed: 0.350 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.052, system: 0.246, elapsed: 1.211 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.356, system: 0.826, elapsed: 25.453 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.427, system: 0.026, elapsed: 1.903 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.964, system: 0.172, elapsed: 13.301 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.018, elapsed: 0.495 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.730, system: 0.286, elapsed: 7.735 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.012, elapsed: 0.356 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.117, system: 0.521, elapsed: 19.367 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.230, system: 1.073, elapsed: 44.374 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64