Last updated on 2025-10-28 10:50:59 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.13 | 252.16 | 265.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.02 | 252.49 | 262.51 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 19.00 | 268.00 | 287.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 19.00 | 293.00 | 312.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/196s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.751, system: 0.081, elapsed: 4.299 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.213, system: 0.409, elapsed: 25.750 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.028, elapsed: 0.668 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.460, system: 0.387, elapsed: 12.194 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.011, elapsed: 0.462 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.462, system: 1.075, elapsed: 45.147 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.925, system: 0.106, elapsed: 5.346 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.107, system: 0.372, elapsed: 23.499 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.020, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.125, system: 0.265, elapsed: 8.858 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.403 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.172, system: 0.915, elapsed: 40.305 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.058, elapsed: 3.967 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.820, system: 0.183, elapsed: 19.756 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.023, elapsed: 0.509 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.282, system: 0.387, elapsed: 8.916 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.374 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.417, system: 0.353, elapsed: 2.996 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.313, system: 1.057, elapsed: 38.355 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.784, system: 0.075, elapsed: 4.366 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.835, system: 0.189, elapsed: 19.799 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.021, elapsed: 0.337 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.237, system: 0.309, elapsed: 8.108 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.278 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 11.464, system: 0.769, elapsed: 23.766 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.425, system: 1.418, elapsed: 58.280 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [95s/217s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.882, system: 0.125, elapsed: 3.361 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.353, system: 0.527, elapsed: 24.601 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.030, elapsed: 0.421 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.163, system: 0.378, elapsed: 8.049 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.013, elapsed: 0.490 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.414, system: 1.122, elapsed: 38.283 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.975, system: 0.133, elapsed: 6.749 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.534, system: 0.670, elapsed: 29.612 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.035, elapsed: 1.006 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.503, system: 0.438, elapsed: 13.635 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.022, elapsed: 0.406 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.117, system: 1.625, elapsed: 54.339 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.972, system: 0.114, elapsed: 3.988 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.126, system: 0.262, elapsed: 21.117 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.022, elapsed: 0.622 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.260, system: 0.388, elapsed: 10.247 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.024, elapsed: 0.330 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.236, system: 0.359, elapsed: 1.894 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.729, system: 1.228, elapsed: 39.905 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.892, system: 0.097, elapsed: 4.815 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.218, system: 0.261, elapsed: 24.094 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.586 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.140, system: 0.315, elapsed: 9.371 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.013, elapsed: 0.638 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 11.388, system: 0.767, elapsed: 28.657 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.791, system: 1.530, elapsed: 69.927 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64