Last updated on 2025-11-01 10:49:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.75 | 244.69 | 257.44 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.00 | 205.69 | 215.69 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 179.00 | 191.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 168.00 | 179.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.044, elapsed: 2.495 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.444, system: 0.127, elapsed: 13.120 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.015, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.917, system: 0.206, elapsed: 5.015 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.881, system: 0.417, elapsed: 21.952 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.496, system: 0.034, elapsed: 1.699 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.406, system: 0.138, elapsed: 11.679 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.090, system: 0.254, elapsed: 6.533 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.930, system: 0.473, elapsed: 21.206 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.882, system: 0.089, elapsed: 3.136 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.718, system: 0.283, elapsed: 14.908 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.016, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.118, system: 0.278, elapsed: 6.640 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.008, elapsed: 0.240 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.246, system: 0.247, elapsed: 1.054 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.971, system: 0.956, elapsed: 27.278 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.747, system: 0.084, elapsed: 2.996 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.629, system: 0.192, elapsed: 26.177 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.535 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.180, system: 0.296, elapsed: 8.306 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.262 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.382, system: 0.903, elapsed: 17.387 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.977, system: 1.544, elapsed: 56.791 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.640, system: 0.057, elapsed: 2.207 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.510, system: 0.169, elapsed: 13.089 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.019, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.937, system: 0.276, elapsed: 5.945 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.009, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.014, system: 0.558, elapsed: 22.530 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.769, system: 0.075, elapsed: 2.568 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.601, system: 0.251, elapsed: 14.388 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.017, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.047, system: 0.283, elapsed: 5.832 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.343, system: 0.683, elapsed: 24.134 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.794, system: 0.076, elapsed: 2.613 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.834, system: 0.370, elapsed: 13.743 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.018, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.872, system: 0.288, elapsed: 4.980 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.019, elapsed: 0.221 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.099, system: 0.259, elapsed: 0.873 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.606, system: 1.078, elapsed: 23.684 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.051, elapsed: 1.708 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.580, system: 0.242, elapsed: 14.255 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.015, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.784, system: 0.199, elapsed: 5.361 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.230 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.609, system: 0.504, elapsed: 17.680 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.547, system: 1.046, elapsed: 40.385 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64