Last updated on 2026-02-03 12:51:51 CET.
| Package | ERROR | OK |
|---|---|---|
| scITD | 1 | 12 |
Current CRAN status: ERROR: 1, OK: 12
Version: 1.0.4
Check: examples
Result: ERROR
Running examples in ‘scITD-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: run_gsea_one_factor
> ### Title: Run gsea separately for all cell types of one specified factor
> ### and plot results
> ### Aliases: run_gsea_one_factor
>
> ### ** Examples
>
> test_container <- run_gsea_one_factor(test_container, factor_select=1,
+ method="fgsea", thresh=0.05, db_use="Hallmark", signed=TRUE)
Warning: The `category` argument of `msigdbr()` is deprecated as of msigdbr 10.0.0.
ℹ Please use the `collection` argument instead.
ℹ The deprecated feature was likely used in the scITD package.
Please report the issue to the authors.
Error in curl::curl_download(url = file_url, destfile = file_path, quiet = verbose, :
HTTP response code said error [zenodo.org]:
The requested URL returned error: 504
Calls: run_gsea_one_factor ... load_msigdb_df -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc