Last updated on 2025-12-06 10:51:05 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| Peptides | 1 | 12 | ||
| retriever | 1 | 12 | ||
| rPanglaoDB | 1 | 12 | ||
| SCORPION | 1 | 12 |
Current CRAN status: WARN: 1, OK: 12
Version: 2.4.6
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/R_ext/Callbacks.h:32:2: warning: ‘#warning’ before C++23 is a GCC extension [-Wc++23-extensions]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Peptides.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’
Flavor: r-devel-linux-x86_64-debian-gcc
Current CRAN status: NOTE: 1, OK: 12
Version: 0.2.1
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ccdata’
Flavor: r-oldrel-macos-arm64
Current CRAN status: ERROR: 1, OK: 12
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in ‘rPanglaoDB-Ex.R’ failed
The error most likely occurred in:
> ### Name: getSampleComposition
> ### Title: Get the cell-type content for each sample from the panglaoDB
> ### database.
> ### Aliases: getSampleComposition
>
> ### ** Examples
>
> # From PanglaoDB
> # https://panglaodb.se/list_clusters_and_cell_types.html?sra=SRA689041&srs=SRS3166675
>
> SRS3166675 <- getSampleComposition(srs = 'SRS3166675')
Error in curl::curl_download(url, file, quiet = quiet, mode = mode, handle = handle) :
Timeout was reached [panglaodb.se]: Resolving timed out after 10002 milliseconds
Calls: getSampleComposition ... getSampleList -> <Anonymous> -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-release-macos-arm64
Current CRAN status: NOTE: 1, OK: 12
Version: 1.2.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'gpuR'
Flavor: r-oldrel-windows-x86_64