Type: Package
Package: junctions
Title: The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
Version: 2.1.4
Authors@R: 
    person(given = "Thijs",
           family = "Janzen",
           role = c("aut", "cre"),
           email = "thijsjanzen@gmail.com")
Description: Individual based simulations of hybridizing populations,
    where the accumulation of junctions is tracked. Furthermore,
    mathematical equations are provided to verify simulation outcomes.
    Both simulations and mathematical equations are based on Janzen
    (2018, <doi:10.1101/058107>) and Janzen (2022,
    <doi:10.1111/1755-0998.13519>).
License: GPL (>= 2)
URL: https://thijsjanzen.github.io/junctions/
BugReports: https://github.com/thijsjanzen/junctions/issues
Depends: RcppParallel (>= 5.0.0)
Imports: nloptr, Rcpp, tibble
Suggests: dplyr, ggplot2, knitr, magrittr, rmarkdown, testthat, tidyr
LinkingTo: nloptr, Rcpp, RcppParallel
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.3.3
SystemRequirements: C++17
NeedsCompilation: yes
Packaged: 2026-03-06 17:18:23 UTC; thijsjanzen
Author: Thijs Janzen [aut, cre]
Maintainer: Thijs Janzen <thijsjanzen@gmail.com>
Repository: CRAN
Date/Publication: 2026-03-07 16:30:07 UTC
Built: R 4.6.0; x86_64-w64-mingw32; 2026-04-29 18:38:42 UTC; windows
Archs: x64
