# Generated by roxygen2: do not edit by hand

export(ConnectivityDiff)
export(add_Genes)
export(calculate_avg_count)
export(check_package)
export(getContactFrequency)
export(getContactProbability)
export(getElbowPoint)
export(get_all_chr_names)
export(get_txdb)
export(hic2community)
export(hic2network)
export(visualizeModule)
import(GenomicFeatures)
import(HiCocietyExample)
import(doParallel)
import(fitdistrplus)
import(foreach)
import(igraph)
import(parallel)
import(shape)
import(strawr)
importFrom(AnnotationDbi,mapIds)
importFrom(GenomicFeatures,genes)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(GenomicRanges,pintersect)
importFrom(GenomicRanges,width)
importFrom(IRanges,IRanges)
importFrom(Rcpp,sourceCpp)
importFrom(S4Vectors,queryHits)
importFrom(S4Vectors,subjectHits)
importFrom(grDevices,colorRampPalette)
importFrom(graphics,abline)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(graphics,segments)
importFrom(graphics,text)
importFrom(pracma,gradient)
importFrom(signal,sgolayfilt)
importFrom(stats,end)
importFrom(stats,pnbinom)
importFrom(stats,start)
importFrom(utils,getFromNamespace)
useDynLib(HiCociety)
