Species Distribution Modeling with H3 Grids

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Documentation for package ‘h3sdm’ version 0.1.0

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bioclim_current Current bioclimatic raster
bioclim_future Future bioclimatic raster
cr_outline_c Costa Rica Continental Outline
h3sdm_calculate_it_metrics Calculate Information Theory Landscape Metrics for Hexagonal Grid
h3sdm_classify Classify predictions based on an optimal threshold
h3sdm_compare_models Compare multiple H3SDM species distribution models
h3sdm_data Combine species and environmental data for SDMs using H3 grids
h3sdm_eval_metrics Evaluate performance metrics for a fitted H3SDM model
h3sdm_explain Create a DALEX explainer for h3sdm workflows
h3sdm_extract_cat Calculate Area Proportions for Categorical Raster Classes
h3sdm_extract_num Extract Area-Weighted Mean from Numeric Raster Stack
h3sdm_fit_model Fits an SDM workflow to data using resampling and prepares it for stacking.
h3sdm_fit_models Fit and evaluate multiple H3SDM species distribution models
h3sdm_get_grid Generar cuadrícula H3 para un área de interés
h3sdm_get_records Query Species Occurrence Records within an H3 Area of Interest (AOI)
h3sdm_get_records_by_hexagon Download Species Records and Count Occurrences per H3 Hexagon
h3sdm_pa Generate presence/pseudo-absence dataset for a species
h3sdm_predict Predict species presence probability using H3 hexagons
h3sdm_predictors Combine Predictor Data from Multiple sf Objects
h3sdm_recipe Create a tidymodels recipe for H3-based SDMs
h3sdm_recipe_gam Creates a 'recipe' object for Generalized Additive Models (GAM) in SDM.
h3sdm_spatial_cv Create a spatial-aware cross-validation split for H3 data
h3sdm_stack_fit Creates and fully fits an ensemble model (Stack).
h3sdm_workflow Create a tidymodels workflow for H3-based SDMs
h3sdm_workflows Create multiple tidymodels workflows for H3-based SDMs
h3sdm_workflow_gam Creates a tidymodels workflow for Generalized Additive Models (GAM).
records Presence/pseudo-absence records for Silverstoneia flotator