* using log directory 'd:/Rcompile/CRANpkg/local/4.5/WormTensor.Rcheck' * using R version 4.5.1 (2025-06-13 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'WormTensor/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'WormTensor' version '0.1.1' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'WormTensor' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [4s] OK * checking whether the package can be loaded with stated dependencies ... [3s] OK * checking whether the package can be unloaded cleanly ... [3s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s] OK * checking whether the namespace can be unloaded cleanly ... [4s] OK * checking loading without being on the library search path ... [4s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [6s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [6s] ERROR Running 'testthat.R' [6s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(WormTensor) > > test_check("WormTensor") trying URL 'https://figshare.com/ndownloader/files/35963780' trying URL 'https://figshare.com/ndownloader/files/35963780' trying URL 'https://figshare.com/ndownloader/files/35963777' trying URL 'https://figshare.com/ndownloader/files/35963780' trying URL 'https://figshare.com/ndownloader/files/35963780' trying URL 'https://figshare.com/ndownloader/files/35963780' [ FAIL 6 | WARN 9 | SKIP 0 | PASS 31 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-as_worm_tensor.R:2:1'): (code run outside of `test_that()`) ──── Error in `download.file("https://figshare.com/ndownloader/files/35963780", tempfile1, mode = "wb")`: cannot open URL 'https://figshare.com/ndownloader/files/35963780' Backtrace: ▆ 1. ├─WormTensor::as_worm_tensor(worm_download()$Ds) at test-as_worm_tensor.R:2:1 2. │ └─WormTensor:::.check_as_worm_tensor(Ds) 3. │ └─base::lapply(...) 4. └─WormTensor::worm_download() 5. └─utils::download.file(...) ── Error ('test-worm_clustering.R:2:1'): (code run outside of `test_that()`) ─── Error in `h(simpleError(msg, call))`: error in evaluating the argument 'object' in selecting a method for function 'worm_membership': cannot open URL 'https://figshare.com/ndownloader/files/35963780' Backtrace: ▆ 1. ├─WormTensor::worm_membership(...) at test-worm_clustering.R:2:1 2. ├─WormTensor::as_worm_tensor(worm_download()$Ds) 3. │ └─WormTensor:::.check_as_worm_tensor(Ds) 4. │ └─base::lapply(...) 5. ├─WormTensor::worm_download() 6. │ └─utils::download.file(...) 7. └─base::.handleSimpleError(...) 8. └─base (local) h(simpleError(msg, call)) ── Error ('test-worm_download.R:7:1'): (code run outside of `test_that()`) ───── Error in `download.file("https://figshare.com/ndownloader/files/35963777", tempfile1, mode = "wb")`: cannot open URL 'https://figshare.com/ndownloader/files/35963777' Backtrace: ▆ 1. └─WormTensor::worm_download("Euclid") at test-worm_download.R:7:1 2. └─utils::download.file(...) ── Error ('test-worm_evaluate.R:2:1'): (code run outside of `test_that()`) ───── Error in `h(simpleError(msg, call))`: error in evaluating the argument 'object' in selecting a method for function 'worm_clustering': error in evaluating the argument 'object' in selecting a method for function 'worm_membership': cannot open URL 'https://figshare.com/ndownloader/files/35963780' Backtrace: ▆ 1. ├─WormTensor::worm_clustering(...) at test-worm_evaluate.R:2:1 2. ├─WormTensor::worm_membership(...) 3. ├─WormTensor::as_worm_tensor(worm_download()$Ds) 4. │ └─WormTensor:::.check_as_worm_tensor(Ds) 5. │ └─base::lapply(...) 6. ├─WormTensor::worm_download() 7. │ └─utils::download.file(...) 8. ├─base::.handleSimpleError(...) 9. │ └─base (local) h(simpleError(msg, call)) 10. └─base::.handleSimpleError(...) 11. └─base (local) h(simpleError(msg, call)) ── Error ('test-worm_membership.R:2:1'): (code run outside of `test_that()`) ─── Error in `download.file("https://figshare.com/ndownloader/files/35963780", tempfile1, mode = "wb")`: cannot open URL 'https://figshare.com/ndownloader/files/35963780' Backtrace: ▆ 1. ├─WormTensor::as_worm_tensor(worm_download()$Ds) at test-worm_membership.R:2:1 2. │ └─WormTensor:::.check_as_worm_tensor(Ds) 3. │ └─base::lapply(...) 4. └─WormTensor::worm_download() 5. └─utils::download.file(...) ── Error ('test-worm_visualize.R:5:1'): (code run outside of `test_that()`) ──── Error in `h(simpleError(msg, call))`: error in evaluating the argument 'object' in selecting a method for function 'worm_visualize': error in evaluating the argument 'object' in selecting a method for function 'worm_evaluate': error in evaluating the argument 'object' in selecting a method for function 'worm_clustering': error in evaluating the argument 'object' in selecting a method for function 'worm_membership': cannot open URL 'https://figshare.com/ndownloader/files/35963780' Backtrace: ▆ 1. ├─WormTensor::worm_visualize(...) at test-worm_visualize.R:5:1 2. ├─WormTensor::worm_evaluate(...) 3. ├─WormTensor::worm_clustering(...) 4. ├─WormTensor::worm_membership(...) 5. ├─WormTensor::as_worm_tensor(worm_download()$Ds) 6. │ └─WormTensor:::.check_as_worm_tensor(Ds) 7. │ └─base::lapply(...) 8. ├─WormTensor::worm_download() 9. │ └─utils::download.file(...) 10. ├─base::.handleSimpleError(...) 11. │ └─base (local) h(simpleError(msg, call)) 12. ├─base::.handleSimpleError(...) 13. │ └─base (local) h(simpleError(msg, call)) 14. ├─base::.handleSimpleError(...) 15. │ └─base (local) h(simpleError(msg, call)) 16. └─base::.handleSimpleError(...) 17. └─base (local) h(simpleError(msg, call)) [ FAIL 6 | WARN 9 | SKIP 0 | PASS 31 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [5s] ERROR Error(s) in re-building vignettes: --- re-building 'WormTensor.Rmd' using rmarkdown trying URL 'https://figshare.com/ndownloader/files/35963780' Quitting from WormTensor.Rmd:38-40 [worm_download] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `download.file()`: ! cannot open URL 'https://figshare.com/ndownloader/files/35963780' --- Backtrace: ▆ 1. └─WormTensor::worm_download() 2. └─utils::download.file(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'WormTensor.Rmd' failed with diagnostics: cannot open URL 'https://figshare.com/ndownloader/files/35963780' --- failed re-building 'WormTensor.Rmd' SUMMARY: processing the following file failed: 'WormTensor.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [22s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 2 ERRORs