| quiddich-package | QUick IDentification of DIagnostic CHaracters | 
| changesAA | Identification of diagnostic molecular characters in a nucleotide alignment that also cause diagnostic characters in the corresponding amino acid alignment | 
| diagCharAA | Identification of diagnostic molecular characters in amino acid alignments for the delineation of taxa | 
| diagCharNA | Identification of diagnostic molecular characters in nucleotide alignments for the delineation of taxa |