clean.fasta.name        Clean the name of a fasta file
dat2fasta               Convert and Save sequence data frame to fasta
                        file
dat2phylip              Conver the data frame to sequential PHYLIP
                        format file
get.fasta.name          get the names of all the sequences of fasta
                        file
get.phylip.name         get the names of sequences from a PHYLIP file
phylotools-package      Phylogenetic tools for building PHYLIP
                        supermatrix and more
read.fasta              Read FASTA file
read.phylip             read phylip file
rename.fasta            Rename the sequences for a fasta file
rm.sequence.fasta       Delete sequences from fasta file
split_dat               grouping the data frame containing sequences
                        and names and generate fasta file
sub.taxa.label          Substitute the tip labels of a phylogenetic
                        tree
supermat                Build PHYLIP supermatrix and RAxML partition
                        file using aligned FASTA or PHYLIP files.
