D.make                  Generate D Matrix
EM.MIM                  EM Algorithm for QTL MIM
EM.MIM2                 EM Algorithm for QTL MIM with Selective
                        Genotyping
EQF.permu               EQF Permutation
EQF.plot                EQF plot
IM.search               QTL search by IM
IM.search2              QTL search by IM with Selective Genotyping
LOD.QTLdetect           QTL Detect by LOD
LRTthre                 LRT Threshold
MIM.points              QTL Short Distance Correction by MIM
MIM.points2             QTL Short Distance Correction by MIM with
                        Selective Genotyping
MIM.search              QTL search by MIM
MIM.search2             QTL search by MIM with Seletive Genotyping
Q.make                  Generate Q Matrix
Qhot                    QTL Hotspot
progeny                 Progeny Simulation
