calculateDistMatOneModel
                        Calculate distance matrix with in one model
cosineSimilarityR       cosine similarity in R
downsampling            Downsampling cells
estimateProb            Estimate the empirical probability of whether
                        two set of cells from distinct batches belong
                        to the same population
finalClustering         Final clustering step for meta-clustering
gatherInitialClusters   Gather initial cluster names
getDistMat              Calculate the Similarity Matrix
getGroupFit             Calculate IDER-based similarity between two
                        groups
getIDEr                 Compute IDER-based similarity
hdbscan.seurat          Initial clustering for evaluating integration
initialClustering       Initial clustering
measureSimilarity       Measure similarity between two vectors
mergeInitialClusters    Merge Initial Clusters
pancreas                Pancreatic scRNA-Seq data.
plotDistMat             Plot Similarity Matrix with pheatmap
plotHeatmap             Plot Heatmap for the IDER-based similarity
                        matrix
plotNetwork             Plot Network Graph
scatterPlot             Scatterplot by a selected feature
