pcr: Analyzing Real-Time Quantitative PCR Data
Calculates the amplification efficiency and curves from real-time quantitative PCR (Polymerase Chain Reaction) data. Estimates the relative expression from PCR data using the double delta CT and the standard curve methods Livak & Schmittgen (2001) <doi:10.1006/meth.2001.1262>. Tests for statistical significance using two-group tests and linear regression Yuan et al. (2006) <doi:10.1186/1471-2105-7-85>.
| Version: | 1.2.2 |
| Depends: | R (≥ 3.4.0) |
| Imports: | ggplot2 |
| Suggests: | testthat, knitr, rmarkdown, covr, cowplot |
| Published: | 2020-04-01 |
| DOI: | 10.32614/CRAN.package.pcr |
| Author: | Mahmoud Ahmed 
[aut, cre] |
| Maintainer: | Mahmoud Ahmed <mahmoud.s.fahmy at students.kasralainy.edu.eg> |
| BugReports: | https://github.com/MahShaaban/pcr/issues |
| License: | GPL-3 |
| URL: | https://github.com/MahShaaban/pcr |
| NeedsCompilation: | no |
| Citation: | pcr citation info |
| Materials: | README, NEWS |
| CRAN checks: | pcr results [issues need fixing before 2025-10-31] |
Documentation:
| Reference manual: | pcr.html , pcr.pdf |
| Vignettes: |
Analysis of real-time qPCR data (source, R code) |
Downloads:
| Package source: | pcr_1.2.2.tar.gz |
| Windows binaries: | r-devel: pcr_1.2.2.zip, r-release: pcr_1.2.2.zip, r-oldrel: pcr_1.2.2.zip |
| macOS binaries: | r-release (arm64): pcr_1.2.2.tgz, r-oldrel (arm64): pcr_1.2.2.tgz, r-release (x86_64): pcr_1.2.2.tgz, r-oldrel (x86_64): pcr_1.2.2.tgz |
| Old sources: | pcr archive |
Linking:
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