geneNR 2.0.1
New Functions and Features
- geneQTL: Identifies candidate genes
based on Quantitative Trait Loci (QTL) analysis.
- import_hmp: Enables importing Hapmap
genotypic data files.
- import_vcf: Provides support for
importing VCF (Variant Call Format) data files.
- plot_SNP: Visualizes SNP distribution
on a chromosome map.
- plot_summariseSNP: Plots SNP
distribution across chromosomes.
- summariseSNP: Calculates SNP
distribution across chromosomes.
- summariseSNP_vcf: Calculates SNP
distribution across chromosomes from VCF data.
Sample Data Additions
- sample_data_rice,- sample_data_rice_qtl: Added rice sample
datasets.
- sample_data_wheat,- sample_data_wheat_custom,- sample_data_wheat_qtl: Added wheat sample
datasets.
Enhancements
- Improved functionality and performance of existing features.
- Updated documentation for better clarity and usability.