A simple, one-command package which runs an interactive dashboard capable of common visualizations for single cell RNA-seq. 'SeuratExplorer' requires a processed 'Seurat' object, which is saved as 'rds' or 'qs2' file.
| Version: |
0.1.2 |
| Depends: |
R (≥ 4.1.0), shiny |
| Imports: |
utils, tools, stats, methods, Seurat (≥ 5.4.0), SeuratObject (≥ 5.3.0), ggplot2 (≥ 4.0.1), shinydashboard, shinydashboardPlus, DT, shinycssloaders, patchwork (≥ 1.3.2), colourpicker, shinyWidgets, scales, shinyjqui, shinyBS, ggalluvial, dplyr, qs2, circlize, reshape2, knitr, markdown |
| Suggests: |
ComplexHeatmap, MAST, limma, DESeq2, Signac |
| Published: |
2026-01-19 |
| DOI: |
10.32614/CRAN.package.SeuratExplorer |
| Author: |
Yongchao Zhang [aut, cre] (https://github.com/fentouxungui) |
| Maintainer: |
Yongchao Zhang <zhangyongchao at nibs.ac.cn> |
| BugReports: |
https://github.com/fentouxungui/SeuratExplorer/issues |
| License: |
GPL (≥ 3) |
| URL: |
https://CRAN.R-project.org/package=SeuratExplorer,
https://github.com/fentouxungui/SeuratExplorer |
| NeedsCompilation: |
no |
| Materials: |
README |
| CRAN checks: |
SeuratExplorer results |