Our method integrates information from all sequenced samples, thus avoiding loss of alleles due to low coverage. Moreover, it increases the statistical power to uncover sequencing or alignment errors <doi:10.1093/plphys/kiad191>.
| Version: |
2.1.0 |
| Depends: |
R (≥ 3.6), GenomicRanges, GenomeInfoDb |
| Imports: |
methods, e1071, extraDistr, reshape2, ggplot2, TailRank, JuliaCall, IRanges, qpdf, grDevices, graphics, stats, utils |
| Suggests: |
knitr, rmarkdown, markdown, Gviz, rtracklayer |
| Published: |
2023-03-29 |
| DOI: |
10.32614/CRAN.package.RTIGER |
| Author: |
Rafael Campos-Martin
 [cre],
Sophia Schmickler [aut],
Manish Goel [ctb],
Korbinian Schneeberger [aut],
Achim Tresch [aut] |
| Maintainer: |
Rafael Campos-Martin <rfael.mpi at gmail.com> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: |
no |
| Materials: |
README |
| CRAN checks: |
RTIGER results [issues need fixing before 2025-10-31] |