PhaseTypeR: General-Purpose Phase-Type Functions
General implementation of core function from phase-type theory. 'PhaseTypeR' can be used to model continuous and discrete phase-type distributions, both univariate and multivariate. The package includes functions for outputting the mean and (co)variance of phase-type distributions; their density, probability and quantile functions; functions for random draws; functions for reward-transformation; and functions for plotting the distributions as networks. For more information on these functions please refer to Bladt and Nielsen (2017, ISBN: 978-1-4939-8377-3) and Campillo Navarro (2019) <https://orbit.dtu.dk/en/publications/order-statistics-and-multivariate-discrete-phase-type-distributio>.
| Version: | 1.0.4 |
| Imports: | expm, igraph, methods |
| Suggests: | knitr, partitions, rmarkdown, testthat |
| Published: | 2022-07-21 |
| DOI: | 10.32614/CRAN.package.PhaseTypeR |
| Author: | Iker Rivas-González
 [aut, cre],
Asger Hobolth [aut],
Lars Nørvang Andersen [aut],
Colin Guetemme [aut] |
| Maintainer: | Iker Rivas-González <ikerrivas96 at gmail.com> |
| BugReports: | https://github.com/rivasiker/PhaseTypeR/issues |
| License: | GPL-3 |
| URL: | https://rivasiker.github.io/PhaseTypeR/, https://github.com/rivasiker/PhaseTypeR |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| In views: | Distributions |
| CRAN checks: | PhaseTypeR results |
Documentation:
| Reference manual: | PhaseTypeR.html , PhaseTypeR.pdf |
| Vignettes: |
PhaseTypeR (source, R code) Using PhaseTypeR for population genetics (source, R code) Using PhaseTypeR for the site frequency spectrum (source, R code) |
Downloads:
| Package source: | PhaseTypeR_1.0.4.tar.gz |
| Windows binaries: | r-devel: PhaseTypeR_1.0.4.zip, r-release: PhaseTypeR_1.0.4.zip, r-oldrel: PhaseTypeR_1.0.4.zip |
| macOS binaries: | r-release (arm64): PhaseTypeR_1.0.4.tgz, r-oldrel (arm64): PhaseTypeR_1.0.4.tgz, r-release (x86_64): PhaseTypeR_1.0.4.tgz, r-oldrel (x86_64): PhaseTypeR_1.0.4.tgz |
| Old sources: | PhaseTypeR archive |
Linking:
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