Gene Scoring from Count Tables [R package GeneScoreR version 0.1.1]

Aris Syntakas

GeneScoreR: Gene Scoring from Count Tables

Provides two methods for automatic calculation of gene scores from gene count tables: the z-score method, which requires a table of samples being scored and a count table with control samples, and the geometric mean method, which does not rely on control samples. The mathematical methods implemented are described by Kim et al. (2018) <doi:10.1089/jir.2017.0127>.

Version:	0.1.1
Published:	2024-10-25
Author:	Aris Syntakas [aut, cre]
Maintainer:	Aris Syntakas <sejjsyn at ucl.ac.uk>
License:	MIT + file LICENSE
NeedsCompilation:	no
CRAN checks:	GeneScoreR results

Documentation:

Reference manual:

GeneScoreR.html , GeneScoreR.pdf

Downloads:

Package source:	GeneScoreR_0.1.1.tar.gz
Windows binaries:	r-devel: GeneScoreR_0.1.1.zip, r-release: GeneScoreR_0.1.1.zip, r-oldrel: GeneScoreR_0.1.1.zip
macOS binaries:	r-release (arm64): GeneScoreR_0.1.1.tgz, r-oldrel (arm64): GeneScoreR_0.1.1.tgz, r-release (x86_64): GeneScoreR_0.1.1.tgz, r-oldrel (x86_64): GeneScoreR_0.1.1.tgz

Linking:

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