BioMonTools: Biomonitoring and Bioassessment Calculations
An aid for manipulating data associated with biomonitoring and bioassessment. Calculations include metric calculation, marking of excluded taxa, subsampling, and multimetric index calculation. Targeted communities are benthic macroinvertebrates, fish, periphyton, and coral. As described in the Revised Rapid Bioassessment Protocols (Barbour et al. 1999) <https://archive.epa.gov/water/archive/web/html/index-14.html>.
| Version: | 1.2.4 |
| Depends: | R (≥ 3.5) |
| Imports: | dplyr, maps, rlang, stats, tidyselect, tidyr |
| Suggests: | DataExplorer, DT, ggplot2, knitr, lazyeval, readxl, reshape2, rmarkdown, testthat, shiny, shinydashboard, shinydashboardPlus, shinyjs, shinyWidgets, utils, writexl, shinyalert |
| Published: | 2025-10-09 |
| DOI: | 10.32614/CRAN.package.BioMonTools (may not be active yet) |
| Author: | Erik W. Leppo 
[aut, cre],
Jen Stamp [ctb],
John van Sickles [ctb],
Ben Block [ctb] |
| Maintainer: | Erik W. Leppo <Erik.Leppo at tetratech.com> |
| BugReports: | https://github.com/leppott/BioMonTools/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/leppott/BioMonTools |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | BioMonTools results |
Documentation:
| Reference manual: | BioMonTools.html , BioMonTools.pdf |
| Vignettes: |
BioMonTools (source, R code) Taxa Maps (source, R code) Add New Index (source, R code) |
Downloads:
| Package source: | BioMonTools_1.2.4.tar.gz |
| Windows binaries: | r-devel: not available, r-release: BioMonTools_1.2.4.zip, r-oldrel: BioMonTools_1.2.4.zip |
| macOS binaries: | r-release (arm64): BioMonTools_1.2.4.tgz, r-oldrel (arm64): BioMonTools_1.2.4.tgz, r-release (x86_64): BioMonTools_1.2.4.tgz, r-oldrel (x86_64): BioMonTools_1.2.4.tgz |
Linking:
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