CRAN Package Check Results for Package qad

Last updated on 2025-09-18 10:53:44 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.5 24.23 166.93 191.16 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.5 16.86 114.27 131.13 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.5 250.57 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.5 288.12 ERROR
r-devel-windows-x86_64 1.0.5 26.00 151.00 177.00 OK
r-patched-linux-x86_64 1.0.5 21.67 156.11 177.78 ERROR
r-release-linux-x86_64 1.0.5 22.42 153.93 176.35 ERROR
r-release-macos-arm64 1.0.5 102.00 OK
r-release-macos-x86_64 1.0.5 142.00 OK
r-release-windows-x86_64 1.0.5 28.00 160.00 188.00 ERROR
r-oldrel-macos-arm64 1.0.5 92.00 OK
r-oldrel-macos-x86_64 1.0.5 136.00 OK
r-oldrel-windows-x86_64 1.0.5 35.00 214.00 249.00 ERROR

Check Details

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [13s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09802747 -0.02265925 2 I2 -0.02265925 0.04061973 3 I3 0.04061973 0.06250214 4 I4 0.06250214 0.10443177 5 I5 0.10443177 0.14728219 6 I6 0.14728219 0.20433566 7 I7 0.20433566 0.25703762 8 I8 0.25703762 0.32195109 9 I9 0.32195109 0.35787618 10 I10 0.35787618 0.49994971 11 I11 0.49994971 0.61128478 12 I12 0.61128478 0.70585294 13 I13 0.70585294 0.76940828 14 I14 0.76940828 0.89143769 15 I15 0.89143769 1.06104890 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 x1=0 0.42 0.12 0.16 0.24 0.06 0.00 0.0000000 0.0000000 0.00 0.00 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.14 0.16 0.3733333 0.1466667 0.12 0.06 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.06 0.06 0.2800000 0.3000000 0.30 0.00 0 0 0 I14 I15 x1=0 0 0 x1=0.5 0 0 x1=-0.5 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.5107330 -1.1406343 2 I2 -1.1406343 -0.6683231 3 I3 -0.6683231 -0.4778017 4 I4 -0.4778017 -0.3290388 5 I5 -0.3290388 -0.0815058 6 I6 -0.0815058 0.1770554 7 I7 0.1770554 0.4071624 8 I8 0.4071624 0.7038090 9 I9 0.7038090 1.0006301 10 I10 1.0006301 1.6238124 11 I11 1.6238124 2.4991611 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.17 0.06 0 0.15 0.07 0.11 0 0.11 0 0.22 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.74943204 -1.52454781 2 I2 -1.52454781 -1.08687651 3 I3 -1.08687651 -0.61415217 4 I4 -0.61415217 -0.41147061 5 I5 -0.41147061 -0.22707410 6 I6 -0.22707410 0.07066038 7 I7 0.07066038 0.23998732 8 I8 0.23998732 0.50577153 9 I9 0.50577153 0.82577057 10 I10 0.82577057 1.18613646 11 I11 1.18613646 1.69215103 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.22 0.11 0.11 0.17 0 1.110223e-16 0.11 0 0.17 0 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2760 0.328 q(x2,x1) 0.3245 0.069 max.dependence 0.3245 0.131 a p.values asymmetry -0.0485 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/11s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.071651765 -0.006931174 2 I2 -0.006931174 0.020934057 3 I3 0.020934057 0.061015338 4 I4 0.061015338 0.085011856 5 I5 0.085011856 0.109527651 6 I6 0.109527651 0.138572105 7 I7 0.138572105 0.184053935 8 I8 0.184053935 0.254536378 9 I9 0.254536378 0.335236260 10 I10 0.335236260 0.436701294 11 I11 0.436701294 0.547300310 12 I12 0.547300310 0.639144926 13 I13 0.639144926 0.765561456 14 I14 0.765561456 0.901621479 15 I15 0.901621479 1.085552962 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.46 0.06 0.18 0.24 0.06 0.00 0.00 0.0 0.00 0.00 0.00 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.08 0.28 0.16 0.3 0.18 0.00 0.00 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.00 0.06 0.06 0.2 0.38 0.18 0.12 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -1.98162275 -1.44910972 2 I2 -1.44910972 -1.07859302 3 I3 -1.07859302 -0.68524588 4 I4 -0.68524588 -0.44298746 5 I5 -0.44298746 -0.02401199 6 I6 -0.02401199 0.30663431 7 I7 0.30663431 0.58082677 8 I8 0.58082677 0.87675167 9 I9 0.87675167 1.14072856 10 I10 1.14072856 1.54662444 11 I11 1.54662444 2.76919014 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.11 0.17 0 0.11 0.11 1.110223e-16 0.11 0.06 0.11 0.11 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.90884073 -1.21247570 2 I2 -1.21247570 -0.78190418 3 I3 -0.78190418 -0.57933649 4 I4 -0.57933649 -0.21851902 5 I5 -0.21851902 -0.04061822 6 I6 -0.04061822 0.08332307 7 I7 0.08332307 0.38080855 8 I8 0.38080855 0.64836657 9 I9 0.64836657 0.87656328 10 I10 0.87656328 1.18304907 11 I11 1.18304907 1.81482940 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0 0 0.11 0 0.11 0.1418182 0.2381818 0.11 0.18 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.3465 0.026 q(x2,x1) 0.2580 0.494 max.dependence 0.3465 0.057 a p.values asymmetry 0.0885 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [11s/11s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.08758418 -0.03428511 2 I2 -0.03428511 0.01149303 3 I3 0.01149303 0.05177759 4 I4 0.05177759 0.08898824 5 I5 0.08898824 0.11064741 6 I6 0.11064741 0.14243489 7 I7 0.14243489 0.19068598 8 I8 0.19068598 0.27288199 9 I9 0.27288199 0.35158872 10 I10 0.35158872 0.44450781 11 I11 0.44450781 0.51243571 12 I12 0.51243571 0.64363766 13 I13 0.64363766 0.77399079 14 I14 0.77399079 0.87429758 15 I15 0.87429758 1.07690276 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.26 0.14 0.3 0.24 0.06 0.00 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.00 0.0 0.00 0.00 0.12 0.04 0.36 0.42 0.06 0 0 0 0 0 x1=-0.5 0.00 0.00 0.0 0.00 0.02 0.10 0.12 0.18 0.22 0.36 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -3.39642655 -1.24464060 2 I2 -1.24464060 -0.74467641 3 I3 -0.74467641 -0.49899976 4 I4 -0.49899976 -0.28770612 5 I5 -0.28770612 0.08823628 6 I6 0.08823628 0.32591857 7 I7 0.32591857 0.64058689 8 I8 0.64058689 0.89817976 9 I9 0.89817976 1.23254113 10 I10 1.23254113 1.56786209 11 I11 1.56786209 2.43249119 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0.22 0 0.23 0.05 0.17 0.11 0.11 0 0.11 2.220446e-16 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.185042259 -1.308338637 2 I2 -1.308338637 -0.824453050 3 I3 -0.824453050 -0.484044849 4 I4 -0.484044849 -0.280627490 5 I5 -0.280627490 -0.005094068 6 I6 -0.005094068 0.243510685 7 I7 0.243510685 0.377241637 8 I8 0.377241637 0.635257563 9 I9 0.635257563 0.973476219 10 I10 0.973476219 1.219192895 11 I11 1.219192895 2.319091861 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.33 0 0.17 0 0 0.06 0.11 0 0.09 0.13 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2220 0.788 q(x2,x1) 0.2205 0.835 max.dependence 0.2220 0.936 a p.values asymmetry 0.0015 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [19s/59s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09816281 -0.03261271 2 I2 -0.03261271 0.01081533 3 I3 0.01081533 0.04126833 4 I4 0.04126833 0.08555942 5 I5 0.08555942 0.12570286 6 I6 0.12570286 0.17489577 7 I7 0.17489577 0.21811342 8 I8 0.21811342 0.27943278 9 I9 0.27943278 0.38835431 10 I10 0.38835431 0.47427045 11 I11 0.47427045 0.58780573 12 I12 0.58780573 0.74800517 13 I13 0.74800517 0.81423651 14 I14 0.81423651 0.88617536 15 I15 0.88617536 1.03831689 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.34 0.3 0.18 0.06 0.12 0.0 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.0 0.00 0.00 0.00 0.0 0.22 0.42 0.30 0.06 0 0 0 0 0 x1=-0.5 0.00 0.0 0.00 0.00 0.00 0.1 0.16 0.20 0.36 0.18 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -3.22441352 -1.32162295 2 I2 -1.32162295 -0.97712839 3 I3 -0.97712839 -0.70506796 4 I4 -0.70506796 -0.37416825 5 I5 -0.37416825 -0.19552163 6 I6 -0.19552163 -0.04977344 7 I7 -0.04977344 0.14971507 8 I8 0.14971507 0.50185034 9 I9 0.50185034 0.72196934 10 I10 0.72196934 1.29609838 11 I11 1.29609838 2.39434673 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.12 0.21 0 0.17 0 1.110223e-16 0.11 0.11 0 0 0.28 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.16943734 -1.40298769 2 I2 -1.40298769 -0.72062957 3 I3 -0.72062957 -0.48859968 4 I4 -0.48859968 -0.30038346 5 I5 -0.30038346 -0.06217938 6 I6 -0.06217938 0.16924955 7 I7 0.16924955 0.34690792 8 I8 0.34690792 0.62883175 9 I9 0.62883175 0.93104059 10 I10 0.93104059 1.25202738 11 I11 1.25202738 2.49334729 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.06 0.11 0 0 0.33 0.11 0 0.22 0 0 0.17 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.264 0.427 q(x2,x1) 0.238 0.657 max.dependence 0.264 0.625 a p.values asymmetry 0.026 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [12s/15s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.099231279 -0.038123532 2 I2 -0.038123532 -0.006487406 3 I3 -0.006487406 0.021932142 4 I4 0.021932142 0.049988095 5 I5 0.049988095 0.078320791 6 I6 0.078320791 0.101911102 7 I7 0.101911102 0.143111212 8 I8 0.143111212 0.216682742 9 I9 0.216682742 0.269014130 10 I10 0.269014130 0.340853423 11 I11 0.340853423 0.493514069 12 I12 0.493514069 0.591869259 13 I13 0.591869259 0.701079893 14 I14 0.701079893 0.862185677 15 I15 0.862185677 1.025787088 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.24 0.1 0.36 0.18 0 0.06 0.06 0.00 0.00 0.00 0.00 0.00 0 0 0 x1=0.5 0.00 0.0 0.00 0.00 0 0.00 0.00 0.12 0.24 0.24 0.34 0.06 0 0 0 x1=-0.5 0.00 0.0 0.00 0.00 0 0.06 0.00 0.18 0.34 0.40 0.02 0.00 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.08908187 -1.13306322 2 I2 -1.13306322 -0.92539949 3 I3 -0.92539949 -0.68116667 4 I4 -0.68116667 -0.37738928 5 I5 -0.37738928 -0.15728354 6 I6 -0.15728354 -0.04983687 7 I7 -0.04983687 0.12547840 8 I8 0.12547840 0.35387512 9 I9 0.35387512 0.62694095 10 I10 0.62694095 1.06676708 11 I11 1.06676708 2.68476925 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0.11 0.11 0.11 0.12 0.11 0 0 0 0.21 0.23 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.2657769 -1.2368465 2 I2 -1.2368465 -1.0440429 3 I3 -1.0440429 -0.6460527 4 I4 -0.6460527 -0.4359399 5 I5 -0.4359399 -0.1706246 6 I6 -0.1706246 0.1079978 7 I7 0.1079978 0.2464800 8 I8 0.2464800 0.5875414 9 I9 0.5875414 0.8966905 10 I10 0.8966905 1.5480425 11 I11 1.5480425 2.8007915 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.01 0.1 0 0 0 0.11 0.11 0.19 0.14 0.18 0.16 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.1965 0.921 q(x2,x1) 0.2205 0.812 max.dependence 0.2205 0.940 a p.values asymmetry -0.024 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running ‘testthat.R’ [13s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.07610171 -0.02848786 2 I2 -0.02848786 0.02189328 3 I3 0.02189328 0.06691524 4 I4 0.06691524 0.09719896 5 I5 0.09719896 0.12496170 6 I6 0.12496170 0.17694210 7 I7 0.17694210 0.22822401 8 I8 0.22822401 0.26893668 9 I9 0.26893668 0.33818511 10 I10 0.33818511 0.44383877 11 I11 0.44383877 0.58830261 12 I12 0.58830261 0.71861759 13 I13 0.71861759 0.77401728 14 I14 0.77401728 0.90664943 15 I15 0.90664943 1.06136889 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.52 0.14 0.12 0.16 0.06 0.00 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.10 0.10 0.26 0.36 0.18 0.00 0 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.16 0.12 0.24 0.18 0.12 0.18 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.6759878 -1.6475385 2 I2 -1.6475385 -1.2449161 3 I3 -1.2449161 -0.7433823 4 I4 -0.7433823 -0.5406386 5 I5 -0.5406386 -0.2137443 6 I6 -0.2137443 0.0112017 7 I7 0.0112017 0.2353746 8 I8 0.2353746 0.6437570 9 I9 0.6437570 1.0196019 10 I10 1.0196019 1.3964220 11 I11 1.3964220 2.6222544 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0 0.22 0 0.04 0.18 0 0 0.06 0.33 0.11 0.06 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.9061500 -1.0175952 2 I2 -1.0175952 -0.6660566 3 I3 -0.6660566 -0.3986291 4 I4 -0.3986291 -0.1428077 5 I5 -0.1428077 0.1567739 6 I6 0.1567739 0.3609870 7 I7 0.3609870 0.4829871 8 I8 0.4829871 0.7111824 9 I9 0.7111824 0.8628424 10 I10 0.8628424 1.2713902 11 I11 1.2713902 2.6226669 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.28 0.17 0 0 0 0.11 0 0.22 0.11 0 0.11 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2385 0.688 q(x2,x1) 0.2280 0.781 max.dependence 0.2385 0.858 a p.values asymmetry 0.0105 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running 'testthat.R' [9s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.09290869 -0.02383969 2 I2 -0.02383969 0.01389381 3 I3 0.01389381 0.05878262 4 I4 0.05878262 0.08135623 5 I5 0.08135623 0.11599796 6 I6 0.11599796 0.15411358 7 I7 0.15411358 0.20912228 8 I8 0.20912228 0.24532943 9 I9 0.24532943 0.35166507 10 I10 0.35166507 0.43348684 11 I11 0.43348684 0.55992649 12 I12 0.55992649 0.71852016 13 I13 0.71852016 0.79876987 14 I14 0.79876987 0.92268199 15 I15 0.92268199 1.07920876 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.24 0.3 0.24 0.12 0.1 0.00 0.00 0.00 0.00 0.0 0.00 0 0 0 0 x1=0.5 0.00 0.0 0.00 0.00 0.0 0.00 0.06 0.24 0.24 0.3 0.16 0 0 0 0 x1=-0.5 0.00 0.0 0.00 0.00 0.0 0.12 0.42 0.20 0.26 0.0 0.00 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -3.02758074 -1.45576711 2 I2 -1.45576711 -0.96799477 3 I3 -0.96799477 -0.49350596 4 I4 -0.49350596 -0.30173562 5 I5 -0.30173562 -0.11177978 6 I6 -0.11177978 0.05729745 7 I7 0.05729745 0.17463022 8 I8 0.17463022 0.41985001 9 I9 0.41985001 0.88402969 10 I10 0.88402969 1.27727079 11 I11 1.27727079 2.60960631 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.1154545 0.05454545 0 0 0.17 0.22 0.11 0 0 0.22 0.11 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.99922140 -1.10786857 2 I2 -1.10786857 -0.70852030 3 I3 -0.70852030 -0.47015751 4 I4 -0.47015751 -0.21308577 5 I5 -0.21308577 0.03380037 6 I6 0.03380037 0.13924611 7 I7 0.13924611 0.31561646 8 I8 0.31561646 0.53578771 9 I9 0.53578771 1.02267775 10 I10 1.02267775 1.22554838 11 I11 1.22554838 2.78308599 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.12 0.12 0.09 0 0.06 0.11 0 0.08 0.25 0 0.17 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.2310 0.729 q(x2,x1) 0.2685 0.380 max.dependence 0.2685 0.595 a p.values asymmetry -0.0375 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-release-windows-x86_64

Version: 1.0.5
Check: tests
Result: ERROR Running 'testthat.R' [13s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(qad) > > test_check("qad") Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 1 4 2 I2 4 16 3 I3 16 36 4 I4 36 64 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 x1=1 1 0 0 0 x1=3 0 1 0 0 x1=5 0 0 1 0 x1=7 0 0 0 1 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -0.098664399 -0.036994966 2 I2 -0.036994966 0.005668544 3 I3 0.005668544 0.052680424 4 I4 0.052680424 0.091953660 5 I5 0.091953660 0.141604451 6 I6 0.141604451 0.195627694 7 I7 0.195627694 0.235298965 8 I8 0.235298965 0.283515119 9 I9 0.283515119 0.363585234 10 I10 0.363585234 0.476656975 11 I11 0.476656975 0.540226418 12 I12 0.540226418 0.681384355 13 I13 0.681384355 0.769581441 14 I14 0.769581441 0.872696259 15 I15 0.872696259 0.989814914 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15 x1=0 0.54 0.14 0.18 0.08 0.06 0.00 0.00 0.00 0.00 0.00 0 0 0 0 0 x1=0.5 0.00 0.00 0.00 0.00 0.06 0.24 0.22 0.24 0.06 0.18 0 0 0 0 0 x1=-0.5 0.00 0.00 0.00 0.00 0.00 0.06 0.06 0.28 0.42 0.18 0 0 0 0 0 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -2.24592579 -1.45662771 2 I2 -1.45662771 -1.07566579 3 I3 -1.07566579 -0.79511495 4 I4 -0.79511495 -0.60124283 5 I5 -0.60124283 -0.42697692 6 I6 -0.42697692 -0.15549778 7 I7 -0.15549778 0.05663157 8 I8 0.05663157 0.43730300 9 I9 0.43730300 0.72786699 10 I10 0.72786699 1.50032785 11 I11 1.50032785 2.91590568 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.23 0.16 0.11 0.11 0 0.11 0.11 0 0.11 0.06 1.110223e-16 Intervalls for the variable x2 Interval lowerBound upperBound 1 I1 -3.4872969 -1.2575585 2 I2 -1.2575585 -0.9294582 3 I3 -0.9294582 -0.5954415 4 I4 -0.5954415 -0.3522134 5 I5 -0.3522134 -0.1135095 6 I6 -0.1135095 0.1811014 7 I7 0.1811014 0.3307064 8 I8 0.3307064 0.5750210 9 I9 0.5750210 1.1307208 10 I10 1.1307208 1.4322579 11 I11 1.4322579 3.0549640 Probability that X2 given X1=x1 lies in the interval I_i : I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 x1=0 0.22 0 0.22 0.11 0 0.22 0.12 0 0.11 0 0 [1] "computation process..." [1] "computation process: 2 / 3" [1] "computation process: 3 / 3" p.values are adjusted by using the method fdr quantification of asymmetric dependencies: Sample Size: 100 Number of unique ranks: x1: 100 x2: 100 (x1,x2): 100 Resolution: 10 x 10 Dependence measures: q p.values q(x1,x2) 0.307 0.135 q(x2,x1) 0.246 0.575 max.dependence 0.307 0.220 a p.values asymmetry 0.061 NA [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-predict.R:42:3'): plot is returned by prediction ───────────── class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:79:3'): heatmap.qad ──────────────────────────────────── class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-qad.R:80:3'): heatmap.qad ──────────────────────────────────── class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:24:3'): plot.qad ────────────────────────── class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:25:3'): plot.qad ────────────────────────── class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:26:3'): plot.qad ────────────────────────── class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:27:3'): plot.qad ────────────────────────── class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:28:3'): plot.qad ────────────────────────── class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:29:3'): plot.qad ────────────────────────── class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" ── Failure ('test-utilityfunctions.R:33:3'): plot_density ────────────────────── class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`). `actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg" `expected[2:2]`: "ggplot" [ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64