Last updated on 2025-12-29 09:49:18 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.06 | 244.27 | 258.33 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.36 | 275.06 | 285.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.19 | 283.55 | 298.74 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.00 | 255.84 | 270.84 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 163.00 | 173.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 192.00 | 213.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 296.00 | 307.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 236.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.658, system: 0.047, elapsed: 2.576 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.576, system: 0.137, elapsed: 12.204 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.016, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.383, system: 0.437, elapsed: 6.011 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.546, system: 0.670, elapsed: 21.969 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.051, elapsed: 1.998 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.438, system: 0.110, elapsed: 10.657 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.233 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.590, system: 0.429, elapsed: 8.638 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.007, elapsed: 0.441 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.555, system: 0.638, elapsed: 22.785 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.037, elapsed: 3.883 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.591, system: 0.090, elapsed: 20.375 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.013, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.511, system: 0.431, elapsed: 6.989 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.289 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.234, system: 0.242, elapsed: 1.143 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.962, system: 0.856, elapsed: 34.309 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.556, system: 0.043, elapsed: 2.039 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.585, system: 0.099, elapsed: 11.870 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.015, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.564, system: 0.432, elapsed: 6.332 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.006, elapsed: 0.258 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.809, system: 0.569, elapsed: 14.097 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.593, system: 1.192, elapsed: 35.823 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/227s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.779, system: 0.087, elapsed: 2.634 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.981, system: 0.303, elapsed: 15.535 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.022, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.431, system: 0.552, elapsed: 6.708 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.010, elapsed: 0.215 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.151, system: 1.011, elapsed: 26.212 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.800, system: 0.085, elapsed: 2.441 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.733, system: 0.196, elapsed: 31.849 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.613 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.379, system: 0.426, elapsed: 13.100 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.458 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.835, system: 0.760, elapsed: 49.708 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.031, elapsed: 4.379 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.688, system: 0.075, elapsed: 25.488 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.013, elapsed: 0.572 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.413, system: 0.428, elapsed: 14.253 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.538 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.220, system: 0.317, elapsed: 2.444 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.966, system: 0.895, elapsed: 49.489 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.039, elapsed: 5.044 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.617, system: 0.076, elapsed: 28.054 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.015, elapsed: 0.635 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.306, system: 0.438, elapsed: 13.266 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.477 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.695, system: 0.537, elapsed: 39.952 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.300, system: 1.132, elapsed: 89.547 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64