Last updated on 2026-03-02 10:52:05 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.78 | 251.23 | 265.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.57 | 211.03 | 223.60 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 340.25 | 371.25 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 278.82 | 294.00 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.86 | 254.60 | 270.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 415.00 | 426.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 881.00 | 891.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 246.00 | 272.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/374s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.613, system: 0.045, elapsed: 2.596 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.417, system: 0.066, elapsed: 12.972 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.019, elapsed: 0.825 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.829, system: 0.713, elapsed: 37.454 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.859, system: 0.867, elapsed: 54.896 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.039, elapsed: 2.229 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.392, system: 0.096, elapsed: 14.035 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.014, elapsed: 0.879 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.836, system: 0.756, elapsed: 87.008 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.851, system: 0.937, elapsed: 105.036 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.541, system: 0.030, elapsed: 2.738 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.059, elapsed: 15.029 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.319, system: 0.015, elapsed: 1.061 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.854, system: 0.803, elapsed: 94.721 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.002, elapsed: 0.168 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.261, system: 0.294, elapsed: 1.080 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.393, system: 1.239, elapsed: 115.816 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.040, elapsed: 2.062 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.574, system: 0.074, elapsed: 13.749 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.015, elapsed: 1.011 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.662, system: 0.722, elapsed: 61.141 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.170 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.286, system: 0.577, elapsed: 12.046 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.146, system: 1.470, elapsed: 91.060 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.042, elapsed: 4.139 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.493, system: 0.053, elapsed: 24.436 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.018, elapsed: 1.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.091, system: 0.900, elapsed: 152.267 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.226 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.142, system: 1.037, elapsed: 183.611 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.627, system: 0.042, elapsed: 2.536 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.596, system: 0.087, elapsed: 14.490 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.015, elapsed: 1.076 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.740, system: 0.891, elapsed: 144.750 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.911, system: 1.060, elapsed: 163.977 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.517, system: 0.030, elapsed: 2.016 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.585, system: 0.075, elapsed: 17.441 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.016, elapsed: 1.023 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.955, system: 0.890, elapsed: 149.614 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.556 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.280, system: 0.323, elapsed: 2.716 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.390, system: 1.363, elapsed: 174.619 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.034, elapsed: 5.233 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.552, system: 0.050, elapsed: 26.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.018, elapsed: 1.215 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.015, system: 0.941, elapsed: 180.158 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.426 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.562, system: 0.669, elapsed: 52.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.811, system: 1.748, elapsed: 267.632 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64