Last updated on 2026-02-09 10:49:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.81 | 248.21 | 261.02 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.57 | 205.71 | 216.28 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.62 | 258.92 | 272.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 252.72 | 266.88 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 777.00 | 788.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 733.00 | 744.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 245.00 | 270.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/12m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.881, system: 0.125, elapsed: 3.851 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.067, system: 0.452, elapsed: 20.210 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.340, system: 0.048, elapsed: 1.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.561, system: 1.529, elapsed: 124.225 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.008, elapsed: 0.481 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.663, system: 2.322, elapsed: 152.072 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.685, system: 0.067, elapsed: 5.478 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.820, system: 0.169, elapsed: 31.067 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.020, elapsed: 1.795 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.731, system: 1.520, elapsed: 179.189 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.008, elapsed: 0.556 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.260, system: 1.924, elapsed: 220.271 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.056, elapsed: 5.124 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.723, system: 0.152, elapsed: 28.618 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.323, system: 0.030, elapsed: 1.440 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.664, system: 1.518, elapsed: 180.189 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.017, elapsed: 0.646 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.372, system: 0.436, elapsed: 2.924 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.589, system: 2.425, elapsed: 221.599 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.675, system: 0.068, elapsed: 5.370 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.695, system: 0.163, elapsed: 30.458 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.022, elapsed: 1.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.535, system: 1.040, elapsed: 35.849 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.191 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.239, system: 1.082, elapsed: 39.304 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.345, system: 2.471, elapsed: 114.276 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.716, system: 0.068, elapsed: 6.364 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.919, system: 0.298, elapsed: 35.878 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.029, elapsed: 1.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.187, system: 2.156, elapsed: 175.539 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.020, elapsed: 0.542 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.969, system: 3.130, elapsed: 224.252 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.825, system: 0.106, elapsed: 4.764 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.044, system: 0.274, elapsed: 23.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.045, elapsed: 1.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.762, system: 2.069, elapsed: 123.110 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.019, elapsed: 0.392 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.790, system: 3.023, elapsed: 156.151 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.952, system: 0.124, elapsed: 3.576 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.879, system: 0.270, elapsed: 18.480 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.028, elapsed: 0.878 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.219, system: 0.995, elapsed: 21.174 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.246 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.267, system: 0.399, elapsed: 1.819 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.467, system: 1.998, elapsed: 47.591 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.747, system: 0.072, elapsed: 3.191 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.859, system: 0.244, elapsed: 15.735 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.253, system: 0.028, elapsed: 0.566 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.828, system: 1.392, elapsed: 110.597 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.019, elapsed: 0.654 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.576, system: 1.194, elapsed: 57.956 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.243, system: 3.347, elapsed: 191.230 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64