Last updated on 2024-05-09 10:50:24 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| easystats | 13 | ||
| esc | 1 | 11 | |
| ggeffects | 1 | 1 | 11 |
| insight | 6 | 7 | |
| parameters | 2 | 4 | 7 |
| performance | 2 | 11 | |
| sjlabelled | 12 | ||
| sjmisc | 12 | ||
| sjPlot | 1 | 11 | |
| sjstats | 12 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 1, OK: 11
Version: 0.5.1
Check: Rd cross-references
Result: NOTE
Undeclared package ‘metafor’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang
Current CRAN status: ERROR: 1, NOTE: 1, OK: 11
Version: 1.5.2
Check: tests
Result: ERROR
Running 'testthat.R' [144s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(ggeffects)
> test_check("ggeffects")
(Intercept) tensionM tensionH
36.38889 -10.00000 -14.72222
Not all rows are shown in the output. Use `print(..., n = Inf)` to show
all rows.
Not all rows are shown in the output. Use `print(..., n = Inf)` to show
all rows.
NOTE: Results may be misleading due to involvement in interactions
NOTE: Results may be misleading due to involvement in interactions
# weights: 16 (9 variable)
initial value 1149.238025
iter 10 value 1015.404427
final value 1013.443395
converged
Re-fitting to get Hessian
Data points may overlap. Use the `jitter` argument to add some amount of
random variation to the location of data points and avoid overplotting.
Data points may overlap. Use the `jitter` argument to add some amount of
random variation to the location of data points and avoid overplotting.
Data points may overlap. Use the `jitter` argument to add some amount of
random variation to the location of data points and avoid overplotting.
Data points may overlap. Use the `jitter` argument to add some amount of
random variation to the location of data points and avoid overplotting.
Re-fitting to get Hessian
Re-fitting to get Hessian
Model contains splines or polynomial terms. Consider using `terms="mined
[all]"` to get smooth plots. See also package-vignette 'Adjusted
Predictions at Specific Values'.
Model contains splines or polynomial terms. Consider using `terms="cover
[all]"` to get smooth plots. See also package-vignette 'Adjusted
Predictions at Specific Values'.
Model contains splines or polynomial terms. Consider using `terms="mined
[all]"` to get smooth plots. See also package-vignette 'Adjusted
Predictions at Specific Values'.
Model contains splines or polynomial terms. Consider using `terms="cover
[all]"` to get smooth plots. See also package-vignette 'Adjusted
Predictions at Specific Values'.
Can't compute adjusted predictions, `effects::Effect()` returned an error.
Reason: Invalid operation on a survival time
You may try `ggpredict()` or `ggemmeans()`.
Can't compute adjusted predictions, `effects::Effect()` returned an error.
Reason: non-conformable arguments
You may try `ggpredict()` or `ggemmeans()`.
[ FAIL 1 | WARN 0 | SKIP 67 | PASS 607 ]
══ Skipped tests (67) ══════════════════════════════════════════════════════════
• On CRAN (64): 'test-MCMCglmm.R:1:1', 'test-MixMod.R:1:1',
'test-avg_predictions.R:24:3', 'test-avg_predictions.R:79:5',
'test-brms-categ-cum.R:1:1', 'test-brms-ppd.R:1:1', 'test-brms-trial.R:1:1',
'test-clean_vars.R:1:1', 'test-clm.R:1:1', 'test-clm2.R:1:1',
'test-clmm.R:1:1', 'test-correct_se_sorting.R:1:1', 'test-decimals.R:1:1',
'test-fixest.R:1:1', 'test-format.R:1:1', 'test-gamlss.R:1:1',
'test-gamm4.R:1:1', 'test-glmer.R:2:1', 'test-glmmTMB.R:1:1',
'test-interval_re.R:1:1', 'test-ivreg.R:1:1',
'test-johnson_neyman_numcat.R:1:1', 'test-list_terms.R:36:3',
'test-lmer.R:1:1', 'test-mgcv.R:1:1', 'test-polr.R:21:7', 'test-polr.R:60:7',
'test-pool_comparisons.R:1:1', 'test-print.R:1:1', 'test-print_digits.R:1:1',
'test-print_md.R:1:1', 'test-print_subsets.R:6:3',
'test-print_subsets.R:11:3', 'test-print_test_predictions-ordinal.R:14:3',
'test-print_test_predictions.R:20:3', 'test-print_test_predictions.R:24:3',
'test-print_test_predictions.R:28:3', 'test-print_test_predictions.R:32:3',
'test-print_test_predictions.R:36:3', 'test-print_test_predictions.R:40:3',
'test-print_test_predictions.R:44:3', 'test-print_test_predictions.R:49:3',
'test-print_test_predictions.R:53:3', 'test-print_test_predictions.R:57:3',
'test-print_test_predictions.R:61:3', 'test-print_test_predictions.R:65:3',
'test-print_test_predictions.R:172:3', 'test-print_test_predictions.R:231:3',
'test-print_test_predictions.R:240:3', 'test-print_test_predictions.R:249:3',
'test-print_test_predictions.R:266:3', 'test-resid_over_grid.R:33:5',
'test-rstanarm-ppd.R:1:1', 'test-rstanarm.R:1:1', 'test-sdmTMB.R:1:1',
'test-simulate.R:1:1', 'test-test_predictions-margin.R:1:1',
'test-test_predictions-mixed.R:1:1', 'test-test_predictions_emmeans.R:126:3',
'test-test_predictions_emmeans.R:161:3', 'test-vcov.R:1:1',
'test-vglm.R:1:1', 'test-zeroinfl.R:27:3', 'test-zi_prob.R:1:1'
• empty test (3): 'test-plot.R:11:1', 'test-polr.R:136:5', 'test-polr.R:142:5'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-ordinal.R:39:3'): print ggpredict ordinal outcome ────────────
out4$response.level (`actual`) not identical to out1$response.level (`expected`).
`actual` is an S3 object of class <factor>, an integer vector
`expected` is a character vector ('definitely', 'probably', 'probably not', 'definitely not', 'definitely', ...)
[ FAIL 1 | WARN 0 | SKIP 67 | PASS 607 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.5.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘rstanarm’
Flavor: r-release-linux-x86_64
Current CRAN status: NOTE: 6, OK: 7
Version: 0.19.10
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘mhurdle’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.19.10
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'blavaan', 'mhurdle'
Flavor: r-patched-linux-x86_64
Version: 0.19.10
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'blavaan', 'mhurdle', 'rstanarm'
Flavor: r-release-linux-x86_64
Current CRAN status: ERROR: 2, NOTE: 4, OK: 7
Version: 0.21.6
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'BayesFM', 'ivprobit'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang
Version: 0.21.6
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ivprobit’
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64
Version: 0.21.6
Check: tests
Result: ERROR
Running ‘testthat.R’ [248s/144s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(parameters)
> library(testthat)
>
> test_check("parameters")
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 97 | PASS 654 ]
══ Skipped tests (97) ══════════════════════════════════════════════════════════
• BayesFM cannot be loaded (1): 'test-model_parameters.efa_cfa.R:69:3'
• On CRAN (84): 'test-GLMMadaptive.R:1:1', 'test-backticks.R:1:1',
'test-bootstrap_emmeans.R:1:1', 'test-bootstrap_parameters.R:1:1',
'test-compare_parameters.R:91:7', 'test-compare_parameters.R:95:5',
'test-complete_separation.R:15:7', 'test-complete_separation.R:27:7',
'test-complete_separation.R:40:7', 'test-efa.R:1:1',
'test-emmGrid-df_colname.R:1:1', 'test-equivalence_test.R:8:3',
'test-format_model_parameters2.R:2:3', 'test-gam.R:30:1',
'test-get_scores.R:1:1', 'test-glmer.R:1:1', 'test-glmmTMB-2.R:1:1',
'test-glmmTMB-profile_CI.R:2:3', 'test-glmmTMB.R:8:1', 'test-helper.R:1:1',
'test-ivreg.R:54:3', 'test-include_reference.R:15:3', 'test-lmerTest.R:1:1',
'test-mipo.R:19:3', 'test-mipo.R:33:3', 'test-mmrm.R:1:1',
'test-model_parameters.anova.R:1:1', 'test-model_parameters.aov.R:1:1',
'test-model_parameters.aov_es_ci.R:158:3',
'test-model_parameters.aov_es_ci.R:269:3',
'test-model_parameters.aov_es_ci.R:318:3',
'test-model_parameters.aov_es_ci.R:371:3',
'test-model_parameters.bracl.R:5:1', 'test-model_parameters.cgam.R:1:1',
'test-model_parameters.epi2x2.R:1:1',
'test-model_parameters.fixest_multi.R:3:1',
'test-model_parameters.fixest.R:2:3', 'test-model_parameters.fixest.R:77:3',
'test-model_parameters.ggeffects.R:12:3', 'test-model_parameters.glm.R:40:3',
'test-model_parameters.glm.R:68:3', 'test-model_parameters.logistf.R:1:1',
'test-model_parameters.mclogit.R:5:1',
'test-model_parameters.mediate.R:32:3', 'test-model_parameters.mixed.R:2:1',
'test-model_parameters.nnet.R:5:1', 'test-model_parameters_df.R:1:1',
'test-model_parameters.vgam.R:3:1', 'test-model_parameters_ordinal.R:1:1',
'test-model_parameters_random_pars.R:1:1', 'test-model_parameters_std.R:1:1',
'test-model_parameters_std_mixed.R:3:1', 'test-n_factors.R:10:3',
'test-n_factors.R:26:3', 'test-n_factors.R:76:3', 'test-p_adjust.R:1:1',
'test-p_value.R:14:1', 'test-panelr.R:1:1', 'test-pipe.R:1:1',
'test-plm.R:111:3', 'test-posterior.R:2:1', 'test-printing-stan.R:2:1',
'test-printing.R:1:1', 'test-pool_parameters.R:11:3', 'test-quantreg.R:1:1',
'test-random_effects_ci.R:4:1', 'test-robust.R:2:1', 'test-rstanarm.R:3:1',
'test-serp.R:17:5', 'test-printing2.R:15:7', 'test-printing2.R:22:7',
'test-printing2.R:27:7', 'test-printing2.R:32:7', 'test-printing2.R:37:7',
'test-printing2.R:49:7', 'test-printing2.R:91:7',
'test-visualisation_recipe.R:7:3', 'test-standardize_parameters.R:30:3',
'test-standardize_parameters.R:55:3', 'test-standardize_parameters.R:169:3',
'test-standardize_parameters.R:288:3', 'test-standardize_parameters.R:319:3',
'test-standardize_parameters.R:411:3', 'test-standardize_parameters.R:501:3'
• On Linux (5): 'test-model_parameters.BFBayesFactor.R:1:1',
'test-nestedLogit.R:78:3', 'test-random_effects_ci-glmmTMB.R:3:1',
'test-simulate_model.R:1:1', 'test-simulate_parameters.R:1:1'
• TODO: fix this test (1): 'test-model_parameters.lqmm.R:40:3'
• TODO: this one actually is not correct. (1):
'test-model_parameters_robust.R:142:3'
• empty test (5): 'test-wrs2.R:8:1', 'test-wrs2.R:18:1', 'test-wrs2.R:30:1',
'test-wrs2.R:43:1', 'test-wrs2.R:55:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-marginaleffects.R:11:3'): marginaleffects() ──────────────────
Names of `out` ('Parameter', 'Comparison', 'Coefficient', 'SE', 'Statistic', 'p', 'S', 'CI', 'CI_low', 'CI_high', 'predicted_lo', 'predicted_hi', 'Predicted') don't match 'Parameter', 'Coefficient', 'SE', 'Statistic', 'p', 'S', 'CI', 'CI_low', 'CI_high'
[ FAIL 1 | WARN 0 | SKIP 97 | PASS 654 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.21.6
Check: tests
Result: ERROR
Running ‘testthat.R’ [253s/148s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(parameters)
> library(testthat)
>
> test_check("parameters")
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 96 | PASS 655 ]
══ Skipped tests (96) ══════════════════════════════════════════════════════════
• On CRAN (84): 'test-GLMMadaptive.R:1:1', 'test-backticks.R:1:1',
'test-bootstrap_emmeans.R:1:1', 'test-bootstrap_parameters.R:1:1',
'test-compare_parameters.R:91:7', 'test-compare_parameters.R:95:5',
'test-complete_separation.R:15:7', 'test-complete_separation.R:27:7',
'test-complete_separation.R:40:7', 'test-efa.R:1:1',
'test-emmGrid-df_colname.R:1:1', 'test-equivalence_test.R:8:3',
'test-format_model_parameters2.R:2:3', 'test-gam.R:30:1',
'test-get_scores.R:1:1', 'test-glmer.R:1:1', 'test-glmmTMB-2.R:1:1',
'test-glmmTMB-profile_CI.R:2:3', 'test-glmmTMB.R:8:1', 'test-helper.R:1:1',
'test-include_reference.R:15:3', 'test-ivreg.R:54:3', 'test-lmerTest.R:1:1',
'test-mipo.R:19:3', 'test-mipo.R:33:3', 'test-mmrm.R:1:1',
'test-model_parameters.anova.R:1:1', 'test-model_parameters.aov.R:1:1',
'test-model_parameters.aov_es_ci.R:158:3',
'test-model_parameters.aov_es_ci.R:269:3',
'test-model_parameters.aov_es_ci.R:318:3',
'test-model_parameters.aov_es_ci.R:371:3',
'test-model_parameters.bracl.R:5:1', 'test-model_parameters.cgam.R:1:1',
'test-model_parameters.epi2x2.R:1:1', 'test-model_parameters.fixest.R:2:3',
'test-model_parameters.fixest.R:77:3',
'test-model_parameters.fixest_multi.R:3:1',
'test-model_parameters.ggeffects.R:12:3', 'test-model_parameters.glm.R:40:3',
'test-model_parameters.glm.R:68:3', 'test-model_parameters.logistf.R:1:1',
'test-model_parameters.mclogit.R:5:1',
'test-model_parameters.mediate.R:32:3', 'test-model_parameters.mixed.R:2:1',
'test-model_parameters.nnet.R:5:1', 'test-model_parameters.vgam.R:3:1',
'test-model_parameters_df.R:1:1', 'test-model_parameters_ordinal.R:1:1',
'test-model_parameters_random_pars.R:1:1', 'test-model_parameters_std.R:1:1',
'test-model_parameters_std_mixed.R:3:1', 'test-n_factors.R:10:3',
'test-n_factors.R:26:3', 'test-n_factors.R:76:3', 'test-p_adjust.R:1:1',
'test-p_value.R:14:1', 'test-panelr.R:1:1', 'test-pipe.R:1:1',
'test-plm.R:111:3', 'test-posterior.R:2:1', 'test-printing-stan.R:2:1',
'test-printing.R:1:1', 'test-pool_parameters.R:11:3', 'test-quantreg.R:1:1',
'test-random_effects_ci.R:4:1', 'test-printing2.R:15:7',
'test-printing2.R:22:7', 'test-printing2.R:27:7', 'test-printing2.R:32:7',
'test-printing2.R:37:7', 'test-printing2.R:49:7', 'test-printing2.R:91:7',
'test-robust.R:2:1', 'test-rstanarm.R:3:1', 'test-serp.R:17:5',
'test-visualisation_recipe.R:7:3', 'test-standardize_parameters.R:30:3',
'test-standardize_parameters.R:55:3', 'test-standardize_parameters.R:169:3',
'test-standardize_parameters.R:288:3', 'test-standardize_parameters.R:319:3',
'test-standardize_parameters.R:411:3', 'test-standardize_parameters.R:501:3'
• On Linux (5): 'test-model_parameters.BFBayesFactor.R:1:1',
'test-nestedLogit.R:78:3', 'test-random_effects_ci-glmmTMB.R:3:1',
'test-simulate_model.R:1:1', 'test-simulate_parameters.R:1:1'
• TODO: fix this test (1): 'test-model_parameters.lqmm.R:40:3'
• TODO: this one actually is not correct. (1):
'test-model_parameters_robust.R:142:3'
• empty test (5): 'test-wrs2.R:8:1', 'test-wrs2.R:18:1', 'test-wrs2.R:30:1',
'test-wrs2.R:43:1', 'test-wrs2.R:55:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-marginaleffects.R:11:3'): marginaleffects() ──────────────────
Names of `out` ('Parameter', 'Comparison', 'Coefficient', 'SE', 'Statistic', 'p', 'S', 'CI', 'CI_low', 'CI_high', 'predicted_lo', 'predicted_hi', 'Predicted') don't match 'Parameter', 'Coefficient', 'SE', 'Statistic', 'p', 'S', 'CI', 'CI_low', 'CI_high'
[ FAIL 1 | WARN 0 | SKIP 96 | PASS 655 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.21.6
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'ivprobit', 'rstanarm'
Flavor: r-release-linux-x86_64
Current CRAN status: NOTE: 2, OK: 11
Version: 0.11.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘blavaan’
Flavor: r-patched-linux-x86_64
Version: 0.11.0
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'blavaan', 'rstanarm'
Flavor: r-release-linux-x86_64
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: NOTE: 1, OK: 11
Version: 2.8.15
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘rstanarm’
Flavor: r-release-linux-x86_64
Current CRAN status: OK: 12