Last updated on 2026-01-02 09:50:34 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| gamboostLSS | 4 | 9 | |
| papeR | 13 | ||
| stabs | 13 |
Current CRAN status: ERROR: 4, OK: 9
Version: 2.1-0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘gamboostLSS_Tutorial.Rnw’ using Sweave
Loading required package: R2BayesX
Installing package into '/home/hornik/tmp/scratch/RtmplHso79/RLIBS_3020f144e3cb03'
(as 'lib' is unspecified)
also installing the dependency 'BayesXsrc'
trying URL 'http://cran.at.r-project.org/src/contrib/BayesXsrc_3.0-6.tar.gz'
trying URL 'http://cran.at.r-project.org/src/contrib/R2BayesX_1.1-6.tar.gz'
Warning: SystemRequirements specified C++14: support has been removed
* installing *source* package ‘BayesXsrc’ ...
** this is package ‘BayesXsrc’ version ‘3.0-6’
** package ‘BayesXsrc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprjuIxx/R.INSTALL31d41e8533816/BayesXsrc/src'
`"/home/hornik/tmp/R.check/r-devel-clang/Work/build/bin/R" CMD config CXX14` `"/home/hornik/tmp/R.check/r-devel-clang/Work/build/bin/R" CMD config CXX14STD` -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib" -I"bayesxsrc/alex" -I"bayesxsrc/adaptiv" -I"bayesxsrc/andrea" -I"bayesxsrc/dag" -I"bayesxsrc/graph" -I"bayesxsrc/mcmc" -I"bayesxsrc/psplines" -I"bayesxsrc/samson" -I"bayesxsrc/leyre" -I"bayesxsrc/structadd" `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bayesxsrc/andrea/baseline.cpp -o bayesxsrc/andrea/baseline.o
'config' variable 'CXX14' is defunct
'config' variable 'CXX14STD' is defunct
/bin/bash: line 1: -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include: No such file or directory
make[1]: *** [/home/hornik/tmp/R.check/r-devel-clang/Work/build/etc/Makeconf:201: bayesxsrc/andrea/baseline.o] Error 127
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprjuIxx/R.INSTALL31d41e8533816/BayesXsrc/src'
ERROR: compilation failed for package ‘BayesXsrc’
* removing ‘/home/hornik/tmp/scratch/RtmplHso79/RLIBS_3020f144e3cb03/BayesXsrc’
ERROR: dependencies ‘BayesXsrc’, ‘mgcv’ are not available for package ‘R2BayesX’
Perhaps try a variation of:
install.packages(c('BayesXsrc', 'mgcv'))
* removing ‘/home/hornik/tmp/scratch/RtmplHso79/RLIBS_3020f144e3cb03/R2BayesX’
The downloaded source packages are in
'/home/hornik/tmp/scratch/Rtmp0wySbD/downloaded_packages'
Loading required package: gamboostLSS
Loading required package: mboost
Loading required package: parallel
Loading required package: stabs
Attaching package: 'gamboostLSS'
The following object is masked from 'package:stats':
model.weights
Error: processing vignette 'gamboostLSS_Tutorial.Rnw' failed with diagnostics:
chunk 11 (label = india_stunting1)
Error in library("R2BayesX") : there is no package called 'R2BayesX'
--- failed re-building 'gamboostLSS_Tutorial.Rnw'
SUMMARY: processing the following file failed:
'gamboostLSS_Tutorial.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.1-0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘gamboostLSS_Tutorial.Rnw’ using Sweave
Loading required package: R2BayesX
Installing package into '/tmp/Rtmp3hFgkX/RLIBS_2fe3c5dff36ae'
(as 'lib' is unspecified)
also installing the dependency 'BayesXsrc'
trying URL 'http://cran.at.r-project.org/src/contrib/BayesXsrc_3.0-6.tar.gz'
trying URL 'http://cran.at.r-project.org/src/contrib/R2BayesX_1.1-6.tar.gz'
Warning: SystemRequirements specified C++14: support has been removed
* installing *source* package ‘BayesXsrc’ ...
** this is package ‘BayesXsrc’ version ‘3.0-6’
** package ‘BayesXsrc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpOJLZCp/R.INSTALL35d87e6c9c9c89/BayesXsrc/src'
`"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/bin/R" CMD config CXX14` `"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/bin/R" CMD config CXX14STD` -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib" -I"bayesxsrc/alex" -I"bayesxsrc/adaptiv" -I"bayesxsrc/andrea" -I"bayesxsrc/dag" -I"bayesxsrc/graph" -I"bayesxsrc/mcmc" -I"bayesxsrc/psplines" -I"bayesxsrc/samson" -I"bayesxsrc/leyre" -I"bayesxsrc/structadd" `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bayesxsrc/andrea/baseline.cpp -o bayesxsrc/andrea/baseline.o
'config' variable 'CXX14' is defunct
'config' variable 'CXX14STD' is defunct
/bin/bash: line 1: -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include: No such file or directory
make[1]: *** [/home/hornik/tmp/R.check/r-devel-gcc/Work/build/etc/Makeconf:201: bayesxsrc/andrea/baseline.o] Error 127
make[1]: Leaving directory '/tmp/RtmpOJLZCp/R.INSTALL35d87e6c9c9c89/BayesXsrc/src'
ERROR: compilation failed for package ‘BayesXsrc’
* removing ‘/tmp/Rtmp3hFgkX/RLIBS_2fe3c5dff36ae/BayesXsrc’
ERROR: dependencies ‘BayesXsrc’, ‘mgcv’ are not available for package ‘R2BayesX’
Perhaps try a variation of:
install.packages(c('BayesXsrc', 'mgcv'))
* removing ‘/tmp/Rtmp3hFgkX/RLIBS_2fe3c5dff36ae/R2BayesX’
The downloaded source packages are in
'/tmp/RtmpXXFCS4/downloaded_packages'
Loading required package: gamboostLSS
Loading required package: mboost
Loading required package: parallel
Loading required package: stabs
Attaching package: 'gamboostLSS'
The following object is masked from 'package:stats':
model.weights
Error: processing vignette 'gamboostLSS_Tutorial.Rnw' failed with diagnostics:
chunk 11 (label = india_stunting1)
Error in library("R2BayesX") : there is no package called 'R2BayesX'
--- failed re-building 'gamboostLSS_Tutorial.Rnw'
SUMMARY: processing the following file failed:
'gamboostLSS_Tutorial.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.1-0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gamboostLSS_Tutorial.Rnw’ using Sweave
Loading required package: R2BayesX
Installing package into '/tmp/RtmpCZdgKi/RLIBS_2a1295786e0fda'
(as 'lib' is unspecified)
also installing the dependency 'BayesXsrc'
trying URL 'http://cran.at.r-project.org/src/contrib/BayesXsrc_3.0-6.tar.gz'
trying URL 'http://cran.at.r-project.org/src/contrib/R2BayesX_1.1-6.tar.gz'
Warning: SystemRequirements specified C++14: support has been removed
* installing *source* package ‘BayesXsrc’ ...
** this is package ‘BayesXsrc’ version ‘3.0-6’
** package ‘BayesXsrc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpCZdgKi/working_dir/RtmpIVraqv/R.INSTALL2cdb3b4ad62a56/BayesXsrc/src'
`"/data/gannet/ripley/R/R-clang/bin/R" CMD config CXX14` `"/data/gannet/ripley/R/R-clang/bin/R" CMD config CXX14STD` -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang21/include -I/usr/local/clang/include -Ibayesxsrc/. -I"bayesxsrc/bib" -I"bayesxsrc/alex" -I"bayesxsrc/adaptiv" -I"bayesxsrc/andrea" -I"bayesxsrc/dag" -I"bayesxsrc/graph" -I"bayesxsrc/mcmc" -I"bayesxsrc/psplines" -I"bayesxsrc/samson" -I"bayesxsrc/leyre" -I"bayesxsrc/structadd" `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -fpic `"/data/gannet/ripley/R/R-clang/bin/R" CMD config CXX14FLAGS` -c bayesxsrc/andrea/baseline.cpp -o bayesxsrc/andrea/baseline.o
'config' variable 'CXX14' is defunct
'config' variable 'CXX14STD' is defunct
'config' variable 'CXX14FLAGS' is defunct
/bin/sh: line 1: -I/data/gannet/ripley/R/R-clang/include: No such file or directory
make[1]: *** [/data/gannet/ripley/R/R-clang/etc/Makeconf:201: bayesxsrc/andrea/baseline.o] Error 127
make[1]: Leaving directory '/tmp/RtmpCZdgKi/working_dir/RtmpIVraqv/R.INSTALL2cdb3b4ad62a56/BayesXsrc/src'
ERROR: compilation failed for package ‘BayesXsrc’
* removing ‘/tmp/RtmpCZdgKi/RLIBS_2a1295786e0fda/BayesXsrc’
ERROR: dependencies ‘BayesXsrc’, ‘mgcv’ are not available for package ‘R2BayesX’
Perhaps try a variation of:
install.packages(c('BayesXsrc', 'mgcv'))
* removing ‘/tmp/RtmpCZdgKi/RLIBS_2a1295786e0fda/R2BayesX’
The downloaded source packages are in
'/tmp/RtmpCZdgKi/working_dir/RtmpT6RCAr/downloaded_packages'
Loading required package: gamboostLSS
Loading required package: mboost
Loading required package: parallel
Loading required package: stabs
Attaching package: 'gamboostLSS'
The following object is masked from 'package:stats':
model.weights
Error: processing vignette 'gamboostLSS_Tutorial.Rnw' failed with diagnostics:
chunk 11 (label = india_stunting1)
Error in library("R2BayesX") : there is no package called 'R2BayesX'
--- failed re-building 'gamboostLSS_Tutorial.Rnw'
SUMMARY: processing the following file failed:
'gamboostLSS_Tutorial.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.1-0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gamboostLSS_Tutorial.Rnw’ using Sweave
Loading required package: R2BayesX
Installing package into '/data/gannet/ripley/R/packages/tests-devel/gamboostLSS.Rcheck'
(as 'lib' is unspecified)
also installing the dependency 'BayesXsrc'
trying URL 'http://cran.at.r-project.org/src/contrib/BayesXsrc_3.0-6.tar.gz'
trying URL 'http://cran.at.r-project.org/src/contrib/R2BayesX_1.1-6.tar.gz'
Warning: SystemRequirements specified C++14: support has been removed
* installing *source* package ‘BayesXsrc’ ...
** this is package ‘BayesXsrc’ version ‘3.0-6’
** package ‘BayesXsrc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpDSuDBY/working_dir/RtmpmH1o1S/R.INSTALL3fd9974d6f285a/BayesXsrc/src'
`"/data/gannet/ripley/R/R-devel/bin/R" CMD config CXX14` `"/data/gannet/ripley/R/R-devel/bin/R" CMD config CXX14STD` -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib" -I"bayesxsrc/alex" -I"bayesxsrc/adaptiv" -I"bayesxsrc/andrea" -I"bayesxsrc/dag" -I"bayesxsrc/graph" -I"bayesxsrc/mcmc" -I"bayesxsrc/psplines" -I"bayesxsrc/samson" -I"bayesxsrc/leyre" -I"bayesxsrc/structadd" `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -fpic `"/data/gannet/ripley/R/R-devel/bin/R" CMD config CXX14FLAGS` -c bayesxsrc/andrea/baseline.cpp -o bayesxsrc/andrea/baseline.o
'config' variable 'CXX14' is defunct
'config' variable 'CXX14STD' is defunct
'config' variable 'CXX14FLAGS' is defunct
/bin/sh: line 1: -I/data/gannet/ripley/R/R-devel/include: No such file or directory
make[1]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:201: bayesxsrc/andrea/baseline.o] Error 127
make[1]: Leaving directory '/tmp/RtmpDSuDBY/working_dir/RtmpmH1o1S/R.INSTALL3fd9974d6f285a/BayesXsrc/src'
ERROR: compilation failed for package ‘BayesXsrc’
* removing ‘/data/gannet/ripley/R/packages/tests-devel/gamboostLSS.Rcheck/BayesXsrc’
ERROR: dependency ‘BayesXsrc’ is not available for package ‘R2BayesX’
Perhaps try a variation of:
install.packages('BayesXsrc')
* removing ‘/data/gannet/ripley/R/packages/tests-devel/gamboostLSS.Rcheck/R2BayesX’
The downloaded source packages are in
'/tmp/RtmpDSuDBY/working_dir/Rtmp1UIF3L/downloaded_packages'
Loading required package: gamboostLSS
Loading required package: mboost
Loading required package: parallel
Loading required package: stabs
Attaching package: 'gamboostLSS'
The following object is masked from 'package:stats':
model.weights
Error: processing vignette 'gamboostLSS_Tutorial.Rnw' failed with diagnostics:
chunk 11 (label = india_stunting1)
Error in library("R2BayesX") : there is no package called 'R2BayesX'
--- failed re-building 'gamboostLSS_Tutorial.Rnw'
SUMMARY: processing the following file failed:
'gamboostLSS_Tutorial.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 13
Current CRAN status: NOTE: 13
Version: 0.6-4
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Benjamin Hofner <benjamin.hofner@pei.de>’
Package CITATION file contains call(s) to old-style personList() or
as.personList(). Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.6-4
Check: Rd files
Result: NOTE
checkRd: (-1) stabsel_parameters.Rd:42: Lost braces
42 | always use code{"none"}.}
| ^
checkRd: (-1) stabsel_stabsel.Rd:25: Lost braces
25 | always use code{"none"}.}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.6-4
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64