84661edc284915bd841829ed59af0046 *DESCRIPTION
c1ad203357afc143ed7b667d3f1297d0 *NAMESPACE
a26657fa5dcb900838b83df52f2b63f5 *NEWS.md
53698149130f7bce750601169c3e0701 *R/data.R
b8828208989edd8a521b652ea8a1905f *R/hmde-package.R
70d7a1340747bef80e73c60430a05f9e *R/hmde_data_template.R
0e52644df13e2cd614e3fb97046f6278 *R/hmde_depreciation.R
274957401347eaf8147522229c14a056 *R/hmde_estimates.R
e14fef45fd68dc8481b5597af032e84d *R/hmde_extract_Rhat.R
dca6c4edf53e6a738c230c9b24ff1f94 *R/hmde_global_and_generic.R
49c396d0c409f25af360fbd26af3cf98 *R/hmde_model.R
31a79f184347c31c51cc01ed08841011 *R/hmde_model_des.R
ca86f0d66fc59c276abf212d152a80f3 *R/hmde_model_names.R
8bc10e4a8222d4ea11d74b35f46a433b *R/hmde_model_pars.R
a268ea6c4bc7583680fe32c2839c924b *R/hmde_plot_Rhat_hist.R
e6199fe31d1b3340591e0da102321123 *R/hmde_plot_de_pieces.R
2fb48de5e8f05e5288c1462700c9d904 *R/hmde_plot_obs_est_inds.R
6e10095295a43bd2b810c807f09d5367 *R/hmde_run.R
d5b681126412a3dbefce24d35b4c4a1e *R/stanmodels.R
67fef6cd79c260a8c3a572e7eab76206 *R/utils.R
db71fdacee4d3fa0ea4a45fca944c681 *README.md
76e123f5dcc8dee07678412adc0a2a84 *build/partial.rdb
19aee09fc2d9110e32b849094cc08e1c *build/vignette.rds
7e297a31e37e77c201a2bacff2f979eb *configure
5fdedca26c8830d7bb06aa1c4a634204 *configure.win
d28406a68be2a0410c76f1e856d9ac18 *data/Lizard_Size_Data.rda
d3f0523b3dc2c11ea508f3b985237b55 *data/Tree_Size_Data.rda
c9464ead9051092d6458603572522756 *data/Tree_Size_Ests.rda
5134bbb80bdba111c17c042bdf961b7d *data/Trout_Size_Data.rda
fb9ec8659f60218a9ea409c2d44f67c9 *inst/article/article.R
2a9b32cef701eba0ab0a5fb679e85dfd *inst/article/article.html
1287a96647f1269c9b22afdb3e52f6a2 *inst/article/article.md
2465e5af1ce42cce47a8a3688a24e5a7 *inst/article/figure/unnamed-chunk-1-1.png
2505adc32987412994c08c3174ac47ff *inst/article/figure/unnamed-chunk-1-2.png
cd6f26a8529e96a972a7c5cd72562951 *inst/article/figure/unnamed-chunk-1-3.png
21811022a12f961cb77522c0103540e0 *inst/article/figure/unnamed-chunk-1-4.png
540c39015e68fc70efb590a00d1d11cf *inst/article/figure/unnamed-chunk-1-5.png
e7d0921db3fddeb678ee95244e10b5ed *inst/article/figure/unnamed-chunk-1-6.png
3796274efa977815b65621b02dc07d65 *inst/article/figure/unnamed-chunk-1-7.png
9cb438a6f02dc4a4915376970593e2df *inst/article/hmde_paper.pdf
091ff071e2a7ba2f3d63d569bef85b5c *inst/doc/canham.R
38f27dbc1e2bd1e1c2dcfa3d412aa113 *inst/doc/canham.Rmd
a41b0fdf80d5c116ce2e44f2125f7795 *inst/doc/canham.html
cab6bc8b327e38c6976e1649bcc06a1a *inst/doc/constant-growth.R
8ee46a568788e76cf90a92cfe4683d78 *inst/doc/constant-growth.Rmd
fa271d7fb111e012ba808a8ec91d8133 *inst/doc/constant-growth.html
5864fe26274a5afcac610981b10796de *inst/doc/here_be_dragons.R
b63f7d00eec4dcdea9cf965e3aaef376 *inst/doc/here_be_dragons.Rmd
c8f235a676c0f897f38d448e459206ff *inst/doc/here_be_dragons.html
21807d83db8b25dcaf044494db4ff30e *inst/doc/hmde.R
f22d09eaa650a5bf2bb9025a44e11e22 *inst/doc/hmde.Rmd
6df6266967b8f099c48eea4ce1449dea *inst/doc/hmde.html
a21e87fdbc36cbc9b33bfb1a77733599 *inst/doc/hmde_for_mathematicians.R
acb09e562453afbbfe4af4dfdaa5cec0 *inst/doc/hmde_for_mathematicians.Rmd
32bf318575630ce509c5c3a9628569fe *inst/doc/hmde_for_mathematicians.html
0b611e99e50cc1cb30699057e20ed91b *inst/doc/von-bertalanffy.R
808d995fce2ecb23d97590250e71dcdf *inst/doc/von-bertalanffy.Rmd
bcb82c3fc914989c7cff9852a5344a2d *inst/doc/von-bertalanffy.html
3a6ae1f2cf3f2572ed845a6624fa4505 *inst/figures/hex.R
d32ac0ebc9682828f26158f843ab2067 *inst/figures/hmde_hex.png
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
45a03232ab27e33ab4b4406cd048761d *inst/stan/affine_single_ind.stan
335ee597673ede9d9be4646db8175fb5 *inst/stan/canham_multi_ind.stan
a2397383917ce29af5018935408fc13e *inst/stan/canham_single_ind.stan
2f41c5ad30a3496a6b6dba6c305716da *inst/stan/constant_multi_ind.stan
7bc79dd7f2fd98c44cf421e98d137624 *inst/stan/constant_single_ind.stan
e7c3b2a5191dfecc18527b3746e35a39 *inst/stan/include/license.stan
8004e5fb5c802e0972171afba9f26076 *inst/stan/vb_multi_ind.stan
78d954df5ff78550d56a93656151b31d *inst/stan/vb_single_ind.stan
1146402060f34cb97a9ea527c2ad1087 *man/Lizard_Size_Data.Rd
da17d8f10acf3e88acce031cbe300704 *man/Tree_Size_Data.Rd
2c8dcadd5709ee6bb9d0adf2fac2dd63 *man/Tree_Size_Ests.Rd
53e6a29201318e6d536b90e79256a26f *man/Trout_Size_Data.Rd
39168dfb7218b4b6c2dcb8e3161107ec *man/error_ests-generic.Rd
3a6ae1f2cf3f2572ed845a6624fa4505 *man/figures/hex.R
d32ac0ebc9682828f26158f843ab2067 *man/figures/hmde_hex.png
282babe2c78ca70f3267818413857c6f *man/fit_summary-generic.Rd
cc6476850e9f1bcaedf9df4b240ffb3a *man/hmde-package.Rd
e92b4b4e2dc778cb6981d7aca9fcd79c *man/hmde_affine_de.Rd
cb9a246a0eafba76008961818bbddec5 *man/hmde_canham_de.Rd
9cb4dc7d5ddc5a84eee164bda55b7398 *man/hmde_const_de.Rd
6cc7915488f19605f5682316efad0d38 *man/hmde_data_template-class.Rd
6aae512006af12c01a9143ac2a6025b2 *man/hmde_estimates-class.Rd
820530e7000000896e9346656cbd6640 *man/hmde_extract_Rhat.Rd
00188e3c87e6c8c000c2d9973016a719 *man/hmde_model.Rd
a6b600c3c2d2347aa271a4582a46ad42 *man/hmde_model_des.Rd
3d76220117b5e2ba767925ae77a73435 *man/hmde_model_names.Rd
39086e011305b3a59edbfbe39f9bffc1 *man/hmde_model_pars.Rd
4d44aeceb553dbb66b6d9e3fd003b1dc *man/hmde_plot_Rhat_hist.Rd
4e3756a160659257feb1ea7f8fa7e226 *man/hmde_plot_de_pieces.Rd
429f8671d96664c123582afc64848d22 *man/hmde_plot_obs_est_inds.Rd
7267b466c844238a8b093eda150b5105 *man/hmde_run.Rd
e4850d8e40577ccb44ec0a09236b7127 *man/hmde_vb_de.Rd
85c2ffde762938a01a01e13f8affe2ff *man/individual_ests-generic.Rd
2625468cf62632a9224ce79bc06fcf4e *man/measurement_ests-generic.Rd
fa188117015874b5829eb8e27c1896bf *man/method-generic.Rd
805a72cc44bdd61fd52066ff156992b3 *man/model_level-generic.Rd
6d72f48bbf609a2557d9004bf979a1b7 *man/model_name-generic.Rd
6e11c8cf8180212a3f7ecb5767571815 *man/par_names-generic.Rd
911797e8b0d12166f2882e09b3364751 *man/population_ests-generic.Rd
d9fee51961fdb8465408f7291c84c996 *man/prior_pars-generic.Rd
6235efbffa813fbbd8f9df9d31d29910 *man/runtime-generic.Rd
564c40d0e86bb1e58d039ff240e97b9f *src/Makevars
caf4cfa219cdc678546e983f706908a4 *src/Makevars.win
1520d65df62f407bb8799d074823a1f5 *src/RcppExports.cpp
1d255a235bcf86d724f0e3b7b005503b *src/stanExports_affine_single_ind.cc
8803ae74f68fa8405ab334c3dd4fe483 *src/stanExports_affine_single_ind.h
f3426eadb60d1665c901e08f1017a710 *src/stanExports_canham_multi_ind.cc
f0c9d9081ddb1e57a0acce698d5a35e1 *src/stanExports_canham_multi_ind.h
cee1042c8e4b4adc427c84ded71d4ea9 *src/stanExports_canham_single_ind.cc
f400d3413f883efa7168921027602bf5 *src/stanExports_canham_single_ind.h
5ac8e8d64a316039ead707ea7c8e9070 *src/stanExports_constant_multi_ind.cc
34ad456ebb91ad6e1136e0cc94e82bc2 *src/stanExports_constant_multi_ind.h
e27d2e096b63a517c4730404d31025bb *src/stanExports_constant_single_ind.cc
f2b32c566ad270bbb6a2ae68fe6731ca *src/stanExports_constant_single_ind.h
cc03f28ea0ab540614f5312133539a24 *src/stanExports_vb_multi_ind.cc
40ca4bcb59195a94a0c10a3853d72877 *src/stanExports_vb_multi_ind.h
df8a9f54d2a20cbb0975b7a1399ba40e *src/stanExports_vb_single_ind.cc
827dac309a867189de9a60d5632cd06d *src/stanExports_vb_single_ind.h
abf938c00cd19565f9fc1002919aa1b6 *tests/testthat.R
c682399ca3de229d025b473d14710f92 *tests/testthat/test-hmde_data_template.R
169a537bdc8eba427aff7ef608a895d4 *tests/testthat/test-hmde_estimates.R
52a200f9a3133ae8298001e2e414c303 *tests/testthat/test-hmde_extract_Rhat.R
4eb198e69176fdbc49eeb44253939531 *tests/testthat/test-hmde_inbuilt_data.R
2c5c6cfb8e32b8aee1a994f5f0b8d893 *tests/testthat/test-hmde_models_affine.R
495f4fc10eb6f2d5fdeceda60d5c0281 *tests/testthat/test-hmde_models_canham.R
e6dea33d8fd3f557a1f4ca10294bbc27 *tests/testthat/test-hmde_models_constant.R
677046459df344fdc8bae9f018d59cf0 *tests/testthat/test-hmde_models_vb.R
7385397fd6e099a7abd0f76e388e778f *tests/testthat/test-hmde_plot_Rhat_hist.R
7c90e3f4d120ed2c73a8654c4d997840 *tests/testthat/test-hmde_plot_de_pieces.R
23bbc8d7129b1d8a9a9a3d7759d852d0 *tests/testthat/test-hmde_plot_obs_est_inds.R
147b4f013f986c7996f9c38cd43b43ef *tests/testthat/test-hmde_run.R
38f27dbc1e2bd1e1c2dcfa3d412aa113 *vignettes/canham.Rmd
8ee46a568788e76cf90a92cfe4683d78 *vignettes/constant-growth.Rmd
b63f7d00eec4dcdea9cf965e3aaef376 *vignettes/here_be_dragons.Rmd
f22d09eaa650a5bf2bb9025a44e11e22 *vignettes/hmde.Rmd
acb09e562453afbbfe4af4dfdaa5cec0 *vignettes/hmde_for_mathematicians.Rmd
28dbc2660ce10485e5cffede460b8576 *vignettes/vignette.bib
808d995fce2ecb23d97590250e71dcdf *vignettes/von-bertalanffy.Rmd
