Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples

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Documentation for package ‘ttScreening’ version 1.8

• DESCRIPTION file.

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ttScreening-package	Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples
firth_screening	ttScreening with Firth bias-reduced logistic regression + multiple testing
irwsva.build2	Adjusted irwsva.build which builds surrogate variables from gene expression data
num.sv2	Adjusted num.sv which estimates the number of important surrogate variables from a gene expression data set.
Rare_Screening	Rare_Screening: resampling-based screening with limma
sva2	The adjusted sva code using irwsva.build2
ttScreening	A screening process built upon training and testing samples