* using log directory 'd:/Rcompile/CRANpkg/local/4.5/RuHere.Rcheck'
* using R version 4.5.3 (2026-03-11 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'RuHere/DESCRIPTION' ... OK
* this is package 'RuHere' version '1.0.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RuHere' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [10s] OK
* checking whether the package can be loaded with stated dependencies ... [9s] OK
* checking whether the package can be unloaded cleanly ... [10s] OK
* checking whether the namespace can be loaded with stated dependencies ... [10s] OK
* checking whether the namespace can be unloaded cleanly ... [10s] OK
* checking loading without being on the library search path ... [10s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [32s] OK
* checking Rd files ... [2s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [7s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [151s] ERROR
Running examples in 'RuHere-Ex.R' failed
The error most likely occurred in:

> ### Name: check_states
> ### Title: Check if the records fall in the state assigned in the metadata
> ### Aliases: check_states
> 
> ### ** Examples
> 
> # Load example data
> data("occurrences", package = "RuHere") #Import data example
> # Subset occurrences for Araucaria angustifolia
> occ <- occurrences[occurrences$species == "Araucaria angustifolia", ]
> # Standardize country names
> occ_country <- standardize_countries(occ = occ,
+                                      return_dictionary = FALSE)
> # Standardize state names
> occ_state <- standardize_states(occ = occ_country,
+                                 country_column = "country_suggested",
+                                 return_dictionary = FALSE)
> # Check whether records fall within assigned states
> occ_state_checked <- check_states(occ = occ_state,
+                                     state_column = "state_suggested")
Warning in check_states(occ = occ_state, state_column = "state_suggested") :
  The following states listed in the 'state_suggested' column were absent in the world map used for validation: NA, mexico
Testing states...
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [143s] OK
* checking PDF version of manual ... [23s] OK
* checking HTML version of manual ... [15s] OK
* DONE
Status: 1 ERROR