| gl.costdistances | Calculates cost distances for a given landscape (resistance matrix) |
| gl.genleastcost | Performs least-cost path analysis based on a friction matrix |
| gl.grm2 | Calculates an identity by descent matrix |
| gl.ibd | Performs isolation by distance analysis |
| gl.kosman | Calculates a Kosman distance matrix for each pair of individuals |
| gl.spatial.autoCorr | Spatial autocorrelation following Smouse and Peakall 1999 |
| gl2shp | Converts a genlight object to ESRI shapefiles or kml files |
| utils.spautocor | Spatial autocorrelation coefficient calculations |