## ----prep--------------------------------------------------------------------- library(coloc) data(coloc_test_data) attach(coloc_test_data) my.res <- coloc.abf(dataset1=D1, dataset2=D2, p12=1e-6) my.res ## ----sens, fig.width=8,fig.height=6------------------------------------------- sensitivity(my.res,rule="H4 > 0.5") ## ----echo=FALSE,results="hide"------------------------------------------------ D1a=D1; D1a$varbeta=D1$varbeta * sqrt(4) D1a$N=D1a$N/4 D2a=D2; D2a$varbeta=D2$varbeta * sqrt(2) D2a$N=D2a$N/2 ## ----sens2, fig.width=8,fig.height=6------------------------------------------ my.res <- coloc.abf(dataset1=D1a, dataset2=D2a, p12=1e-6) my.res sensitivity(my.res,rule="H4 > 0.5") ## ----sens3, fig.width=8,fig.height=6------------------------------------------ sensitivity(my.res,rule="H4 > 3*H3 & H0 < 0.1")