## ----setup, include = FALSE---------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) library(armspp) ## ----normal_example------------------------------------------------------ output <- arms( 5000, function(x) -x ^ 2 / 2, -1000, 1000, metropolis = FALSE, include_n_evaluations = TRUE ) print(str(output)) hist(output$samples, br = 50, freq = FALSE, main = 'Normal samples') shapiro.test(output$samples) ## ----mixture_of_normals_density------------------------------------------ dnormmixture <- function(x) { parts <- log(c(0.4, 0.6)) + dnorm(x, mean = c(-1, 4), log = TRUE) log(sum(exp(parts - max(parts)))) + max(parts) } curve(exp(Vectorize(dnormmixture)(x)), -7, 10) ## ----mixture_of_normals_example------------------------------------------ samples <- arms(1000, dnormmixture, -1000, 1000) hist(samples, freq = FALSE, br = 50) curve(exp(Vectorize(dnormmixture)(x)), -7, 10, col = 'red', add = TRUE)