## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) tryCatch({ Sys.setlocale("LC_ALL", "English") }) eval_chunks <- CopernicusMarine:::has_blosc && curl::has_internet() && CopernicusMarine::cms_get_password() != "" && sf::st_drivers("raster", "^HDF5$")$vsi ## ----create_proxy, eval=eval_chunks------------------------------------------- library(CopernicusMarine) |> suppressMessages() library(stars) |> suppressMessages() my_proxy_gc <- cms_zarr_proxy( product = "GLOBAL_ANALYSISFORECAST_PHY_001_024", layer = "cmems_mod_glo_phy-thetao_anfc_0.083deg_P1D-m", asset = "geoChunked") my_proxy_tc <- cms_zarr_proxy( product = "GLOBAL_ANALYSISFORECAST_PHY_001_024", layer = "cmems_mod_glo_phy-thetao_anfc_0.083deg_P1D-m", asset = "timeChunked") print(my_proxy_tc) ## ----slice_time, eval=eval_chunks--------------------------------------------- time_slice <- my_proxy_gc[,2000, 1000, 48, 1:400] show(time_slice) ## ----set_par, results='hide', echo=FALSE-------------------------------------- opar <- par(mar = c(3, 3, 0.5, 0.5), mgp = c(2, .8, 0)) ## ----plot_time_slice, eval=eval_chunks---------------------------------------- time_slice <- st_as_stars(time_slice) plot(st_get_dimension_values(time_slice, "time"), time_slice$thetao, xlab = "date", ylab = "temperature", type = "l") ## ----reset_par, results='hide', echo=FALSE------------------------------------ par(opar) ## ----slice_area, eval=eval_chunks--------------------------------------------- geo_slice <- my_proxy_tc[,2000:2500, 1500:1750, 50, 500] plot(geo_slice, col = hcl.colors(10))