Last updated on 2026-02-01 11:49:53 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.94 | 253.68 | 267.62 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.38 | 207.04 | 217.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.60 | 288.17 | 302.77 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 634.00 | 644.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 628.00 | 639.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 252.00 | 277.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [104s/588s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.047, elapsed: 1.747 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.405, system: 0.174, elapsed: 11.553 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.018, elapsed: 0.484 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.691, system: 0.904, elapsed: 48.896 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.006, elapsed: 0.176 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.682, system: 1.186, elapsed: 63.491 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.753, system: 0.060, elapsed: 1.648 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.411, system: 0.270, elapsed: 10.380 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.272, system: 0.032, elapsed: 0.566 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.719, system: 0.976, elapsed: 151.498 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.482 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.006, system: 1.387, elapsed: 165.311 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.031, elapsed: 4.392 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.588, system: 0.053, elapsed: 26.427 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.316, system: 0.016, elapsed: 1.379 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.170, system: 0.947, elapsed: 181.989 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.561 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.288, system: 0.363, elapsed: 2.526 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.783, system: 1.463, elapsed: 219.192 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.054, elapsed: 4.622 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.610, system: 0.098, elapsed: 25.564 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.016, elapsed: 1.161 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.456, system: 0.810, elapsed: 72.099 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.223 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.168, system: 0.716, elapsed: 27.954 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.001, system: 1.735, elapsed: 133.140 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [107s/531s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.638, system: 0.043, elapsed: 5.004 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.501, system: 0.070, elapsed: 25.815 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.018, elapsed: 1.223 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.938, system: 0.928, elapsed: 181.346 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.441 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.039, system: 1.086, elapsed: 215.308 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.034, elapsed: 4.717 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.537, system: 0.050, elapsed: 26.422 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.018, elapsed: 1.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.883, system: 0.937, elapsed: 179.495 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.008, elapsed: 0.314 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.999, system: 1.070, elapsed: 213.520 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.638, system: 0.062, elapsed: 3.317 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.746, system: 0.239, elapsed: 18.809 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 1.423 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.462, system: 0.795, elapsed: 28.256 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.005, elapsed: 0.176 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.174, system: 0.311, elapsed: 0.931 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.077, system: 1.462, elapsed: 54.287 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.032, elapsed: 1.910 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.447, system: 0.110, elapsed: 12.551 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.014, elapsed: 0.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.920, system: 0.815, elapsed: 8.701 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.166 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 15.565, system: 0.977, elapsed: 12.892 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 36.718, system: 1.988, elapsed: 37.288 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64