Last updated on 2026-04-24 13:48:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.04 | 304.90 | 319.94 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.48 | 238.83 | 250.31 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 300.78 | 323.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 341.93 | 373.93 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 345.71 | 360.26 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 334.90 | 349.10 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 598.00 | 610.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 188.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 637.00 | 650.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/544s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.621, system: 0.042, elapsed: 2.869 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.627, system: 0.066, elapsed: 13.510 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.016, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.436, system: 0.839, elapsed: 112.202 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.332 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.679, system: 0.991, elapsed: 130.086 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.031, elapsed: 2.314 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.676, system: 0.079, elapsed: 13.318 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.015, elapsed: 1.117 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.319, system: 0.801, elapsed: 112.046 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.003, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.614, system: 0.946, elapsed: 129.809 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.512, system: 0.030, elapsed: 2.364 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.660, system: 0.067, elapsed: 13.129 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.017, elapsed: 1.172 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.334, system: 0.829, elapsed: 78.412 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.239 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.259, system: 0.253, elapsed: 0.987 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.832, system: 1.220, elapsed: 97.228 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.033, elapsed: 1.992 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.637, system: 0.060, elapsed: 13.678 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.018, elapsed: 1.066 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.247, system: 0.887, elapsed: 125.897 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.003, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.975, system: 0.663, elapsed: 35.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.547, system: 1.692, elapsed: 178.880 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [123s/564s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.751, system: 0.085, elapsed: 4.316 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.028, system: 0.219, elapsed: 19.889 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.032, elapsed: 1.193 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.512, system: 1.403, elapsed: 84.063 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.019, elapsed: 0.493 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.455, system: 2.234, elapsed: 112.486 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.715, system: 0.088, elapsed: 2.940 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.032, system: 0.313, elapsed: 18.708 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.436, system: 0.034, elapsed: 0.213 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 10.406, system: 1.129, elapsed: 21.355 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.011, elapsed: 0.463 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.495, system: 1.980, elapsed: 45.582 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.734, system: 0.088, elapsed: 3.210 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.294, system: 0.384, elapsed: 21.330 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.032, elapsed: 1.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.850, system: 4.124, elapsed: 162.583 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.030, elapsed: 0.871 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.499, system: 0.479, elapsed: 3.892 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.631, system: 5.634, elapsed: 196.091 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.849, system: 0.174, elapsed: 7.098 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.252, system: 0.444, elapsed: 29.382 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.035, elapsed: 1.194 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.381, system: 2.655, elapsed: 110.003 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.012, elapsed: 0.348 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.342, system: 1.427, elapsed: 45.359 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 34.146, system: 5.299, elapsed: 197.009 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64