An R interface to the Ontology Lookup Service

---

Documentation for package ‘rols’ version 3.7.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

A C D I L O P R S T U misc

-- A --

allRows	Querying OLS
ancestors	Ontology Terms
as.character.CVParam	Controlled Vocabulary
as.data.frame.olsOntologies	olsOntologies
as.data.frame.OlsSearch	Querying OLS
as.olsTerm.data.frame	Ontology Terms
as.olsTerms.data.frame	Ontology Terms

-- C --

charIsCVParam	Controlled Vocabulary
children	Ontology Terms
cvCharToCVPar	Controlled Vocabulary
CVParam	Controlled Vocabulary

-- D --

descendants

Ontology Terms

-- I --

isObsolete	Ontology Terms
isObsolete,olsTerm	Ontology Terms
isObsolete,olsTerms	Ontology Terms
isObsolete-method	Ontology Terms
isRoot	Ontology Terms
isRoot,olsTerm	Ontology Terms
isRoot,olsTerms	Ontology Terms
isRoot-method	Ontology Terms

-- L --

lapply-method	olsOntologies
lapply-method	Ontology Terms
length-method	olsOntologies
length-method	Term Properties
length-method	Ontology Terms

-- O --

olsConfig	olsOntologies
olsConfig,olsOntology	olsOntologies
olsConfig-method	olsOntologies
olsDesc	olsOntologies
olsDesc,character	olsOntologies
olsDesc,olsOntologies	olsOntologies
olsDesc,olsOntology	olsOntologies
olsDesc-method	olsOntologies
olsLinks	olsOntologies
olsLinks,olsOntology	olsOntologies
olsLinks-method	olsOntologies
olsLoaded	olsOntologies
olsLoaded,character	olsOntologies
olsLoaded,olsOntologies	olsOntologies
olsLoaded,olsOntology	olsOntologies
olsLoaded-method	olsOntologies
olsNamespace	olsOntologies
olsNamespace,character	olsOntologies
olsNamespace,olsOntologies	olsOntologies
olsNamespace,olsOntology	olsOntologies
olsNamespace-method	olsOntologies
olsOntologies	olsOntologies
olsOntologies-method	olsOntologies
olsOntology	olsOntologies
olsOntology-method	olsOntologies
olsPrefix	olsOntologies
olsPrefix,character	olsOntologies
olsPrefix,olsOntologies	olsOntologies
olsPrefix,olsOntology	olsOntologies
olsPrefix-method	olsOntologies
olsProperties	Term Properties
olsProperties,character	Term Properties
olsProperties,length	Term Properties
olsProperties,olsOntology	Term Properties
olsProperties,olsTerm	Term Properties
olsProperties,olsTerms	Term Properties
olsProperties-method	Term Properties
olsProperty	Term Properties
olsRows	Querying OLS
olsRows<-	Querying OLS
OlsSearch	Querying OLS
olsSearch	Querying OLS
olsStatus	olsOntologies
olsStatus,character	olsOntologies
olsStatus,olsOntologies	olsOntologies
olsStatus,olsOntology	olsOntologies
olsStatus-method	olsOntologies
olsTerm	Ontology Terms
olsTerm-method	Ontology Terms
olsTerms	Ontology Terms
olsTerms,character	Ontology Terms
olsTerms,olsOntology	Ontology Terms
olsTerms-method	Ontology Terms
olsTitle	olsOntologies
olsTitle,character	olsOntologies
olsTitle,olsOntologies	olsOntologies
olsTitle,olsOntology	olsOntologies
olsTitle-method	olsOntologies
olsUpdated	olsOntologies
olsUpdated,character	olsOntologies
olsUpdated,olsOntologies	olsOntologies
olsUpdated,olsOntology	olsOntologies
olsUpdated-method	olsOntologies
olsVersion	olsOntologies
olsVersion,character	olsOntologies
olsVersion,olsOntologies	olsOntologies
olsVersion,olsOntology	olsOntologies
olsVersion-method	olsOntologies
ontologyUrl	olsOntologies
ontologyUrl,character	olsOntologies
ontologyUrl,olsOntology	olsOntologies
ontologyUrl-method	olsOntologies

-- P --

parents

Ontology Terms

-- R --

rep-method

Controlled Vocabulary

-- S --

show-method	Controlled Vocabulary
show-method	Querying OLS
show-method	olsOntologies
show-method	Term Properties
show-method	Ontology Terms

-- T --

termDesc	Ontology Terms
termDesc,olsTerm	Ontology Terms
termDesc,olsTerms	Ontology Terms
termDesc-method	Ontology Terms
termId	Ontology Terms
termId,olsTerm	Ontology Terms
termId,olsTerms	Ontology Terms
termId-method	Ontology Terms
termLabel	Ontology Terms
termLabel,olsTerm	Ontology Terms
termLabel,olsTerms	Ontology Terms
termLabel-method	Ontology Terms
termLinks	Ontology Terms
termLinks,olsTerm	Ontology Terms
termLinks-method	Ontology Terms
termNamespace	Ontology Terms
termNamespace,olsTerm	Ontology Terms
termNamespace,olsTerms	Ontology Terms
termNamespace-method	Ontology Terms
termOntology	Ontology Terms
termOntology,olsTerm	Ontology Terms
termOntology,olsTerms	Ontology Terms
termOntology-method	Ontology Terms
termPrefix	Ontology Terms
termPrefix,olsTerm	Ontology Terms
termPrefix,olsTerms	Ontology Terms
termPrefix-method	Ontology Terms
termSynonym	Ontology Terms
termSynonym,olsTerm	Ontology Terms
termSynonym,olsTerms	Ontology Terms
termSynonym-method	Ontology Terms

-- U --

unique-method

Ontology Terms

-- misc --

'olsRows<-'	Querying OLS
.OlsSearch	Querying OLS
[-method	olsOntologies
[-method	Ontology Terms
[[-method	olsOntologies
[[-method	Ontology Terms