Package: GNET2
Type: Package
Title: Constructing gene regulatory networks from expression data
        through functional module inference
Version: 1.27.0
Author: Chen Chen, Jie Hou and Jianlin Cheng
Maintainer: Chen Chen <ccm3x@mail.missouri.edu>
Description: Cluster genes to functional groups with E-M process.
        Iteratively perform TF assigning and Gene assigning, until the
        assignment of genes did not change, or max number of iterations
        is reached.
License: Apache License 2.0
Encoding: UTF-8
LinkingTo: Rcpp
Depends: R (>= 3.6)
Imports:
        ggplot2,xgboost,Rcpp,reshape2,grid,DiagrammeR,methods,stats,matrixStats,graphics,SummarizedExperiment,dplyr,igraph,
        grDevices, utils
RoxygenNote: 7.1.0
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
biocViews: GeneExpression, Regression, Network, NetworkInference,
        Software
URL: https://github.com/chrischen1/GNET2
BugReports: https://github.com/chrischen1/GNET2/issues
Config/pak/sysreqs: libglpk-dev make libicu-dev libxml2-dev libx11-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:51:02 UTC
RemoteUrl: https://github.com/bioc/GNET2
RemoteRef: HEAD
RemoteSha: 2926e7b61d9f358767a8681eaf3513ba6d7ddc97
NeedsCompilation: yes
Packaged: 2025-11-02 14:56:38 UTC; root
Built: R 4.6.0; x86_64-w64-mingw32; 2025-11-02 14:58:20 UTC; windows
Archs: x64
