Package: sfi
Type: Package
Title: Data analysis for Single File Injections (SFIs) mode LC-MS
        analysis
Version: 1.0.0
Authors@R: person(given = "Miao", family = "YU",
        role = c("aut", "cre"), 
        email = "yufreecas@gmail.com",
        comment = c(ORCID = "0000-0002-2804-6014"))
Description: Data analysis for Single File Injections(SFIs) mode LC-MS analysis. In SFIs mode, pooled samples are initially injected to serve as reference peaks for subsequent analyses. Repeated injections of individual samples are then performed at fixed time intervals using isocratic elution. This package provides the functions to analyze data from SFIs mode including peak picking and peak reassignment.
URL: https://github.com/yufree/sfi
BugReports: https://github.com/yufree/sfi/issues/new
License: MIT + file LICENSE
Depends: R (>= 4.5.0)
LinkingTo: Rcpp
Imports: Rcpp, enviGCMS, stats, mzR, rmarkdown, methods,
        SummarizedExperiment, S4Vectors
Suggests: knitr, data.table, BiocStyle, ggplot2, MsCoreUtils, testthat
        (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: MassSpectrometry, Metabolomics, FeatureExtraction
Encoding: UTF-8
RoxygenNote: 7.3.3
LazyData: false
git_url: https://git.bioconductor.org/packages/sfi
git_branch: RELEASE_3_23
git_last_commit: 8292496
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28
NeedsCompilation: yes
Packaged: 2026-04-29 00:41:07 UTC; biocbuild
Author: Miao YU [aut, cre] (ORCID: <https://orcid.org/0000-0002-2804-6014>)
Maintainer: Miao YU <yufreecas@gmail.com>
